Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0903 ATGGCCCTCCAAGAGCTTTCCTTATGTCTACCTCTTCTCCTACTTCTATCTCTCATTTTCCTTCTTAAGAAAAAGAAGAAACGTGAACAAAGAAACTACCCACCAAGCCCCCCGAAGCTTCCCTTTATTGGTAACTTGCACCAAATAGGAGCATTGCCTCATTCTTCTATGTACCATCTCTCCAAGACACATGGCCCAATCATGTCCTTACAACTCGGTCGATTTCCAACCCTGATAATCTCCTCCGCTGAAGCTGCCAAAGATATCTTGAAAACTCATGATCTTGCTTGTTGTAGTAGACCCACAATGGCAGGGTCAGAAAGACTCACGTATAACTACATTGACATGGCATTTTCACCTTATAGTGACTATTGGCGAGAGATAAGAAAACTATGTGTTCTTGAACTTTTTAGTGTGAAGAGGGTGAGATCCTATCAAGTTGTTCGGAAAGAAGAAGTTAATTTGGTTGTTGAATCTATAAAAGATAGTGCAATTAAGGAAAGTTATATCCCGGTTGATCTTACGGAGAAGTTATTTGCCCTAATGGCTAGTGTGATTTATAGGATTGCTTTTGGGAGGAGGTTTAAAGCAAGTGATTTGAAATATCATAAGACAGTTCAAGACGTTATTCATGAAATTGGAGCCTTGATGGGCAGTTTTCAAGCTTCAGAGTGCTTTCACCCTTTTGTGGGATGGATTATTGATAAGCTAACTGGTCAACATCAAAGGCTTGAAAGGGTTTTTAATGAGTTGGATACTTGTTTCCAACAGTTGATTGATGATCATTTCGACCCAGCTCGGATTAAACAGGATCAAGAAGATATTATTGATGTGCTTTTGGGAATTTTGAGGGGACAACATGAGGTTGGTGTTGCTTTGAAAGGCACAGATAACATCAAGGCGATCCTTATGAACATATTTTTAGGTGGAATAGACACTAGTGCTGTCACTATGGTCTGGGCAATGGCAGAGCTAGCGAGAAACCCTAAAATAATGAGAAAAGCACAGGAAGAAGTTAGACATGTGATGAAATCAAAAGGAAGAGTCACCGAAGATGACATCGGCCAACTTCAATATCTAAAATTGATAGTTAAAGAAACATTTAGACTTCATCCTCCAGCTCCATTGCTACTTCCAAGACAAACCATATCAAGTTTCAACTTACAAGGCTATGATATCCCACCTAAAACACTTATCCAAGTGAACGCTTGGGCGATCGGAAGGGACCCTCGGTACTGGAAAAACCCGGAAGCATTCATTCCAGAGAGGTTTGAAGATAGCTCGGCCGATTTTAAATGGAAAAATTATGAGTACTTGCCATTTGGAGGTGGTAGAAGAGGTTGCCCCGGAATTTACATGGGAACAACAATGATTGAGCTTGTTTTGGCGAACTTGCTATATTGGTTTGATTGGAAATTGACTGATGAGATGAAGCTTGAGGATTTAAATATGGAAGAAAGTATTGGTCGTAACTTGACAGTTTCAAAAAAGAAACCCCTCATTCTTATGCCTTTAATTCCAGGTTCATCAAGATGA 1536 39.97 MALQELSLCLPLLLLLSLIFLLKKKKKREQRNYPPSPPKLPFIGNLHQIGALPHSSMYHLSKTHGPIMSLQLGRFPTLIISSAEAAKDILKTHDLACCSRPTMAGSERLTYNYIDMAFSPYSDYWREIRKLCVLELFSVKRVRSYQVVRKEEVNLVVESIKDSAIKESYIPVDLTEKLFALMASVIYRIAFGRRFKASDLKYHKTVQDVIHEIGALMGSFQASECFHPFVGWIIDKLTGQHQRLERVFNELDTCFQQLIDDHFDPARIKQDQEDIIDVLLGILRGQHEVGVALKGTDNIKAILMNIFLGGIDTSAVTMVWAMAELARNPKIMRKAQEEVRHVMKSKGRVTEDDIGQLQYLKLIVKETFRLHPPAPLLLPRQTISSFNLQGYDIPPKTLIQVNAWAIGRDPRYWKNPEAFIPERFEDSSADFKWKNYEYLPFGGGRRGCPGIYMGTTMIELVLANLLYWFDWKLTDEMKLEDLNMEESIGRNLTVSKKKPLILMPLIPGSSR 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 6532244 6533924 + Conep20aG0093100.1 Cone20ag0903 460807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0903 511 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 CDD CYP71-like 63 500 - -
Cone20ag0903 511 FunFam Cytochrome P450 83B1 20 503 - -
Cone20ag0903 511 Pfam Cytochrome P450 34 486 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone20ag0903 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0903 511 PANTHER CYTOCHROME P450 71B11-RELATED 14 504 IPR050193 -
Cone20ag0903 511 Gene3D Cytochrome P450 19 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0473 Cone-Chr17:2277104 Cone20ag0903 Cone-Chr20:6532244 6.61E-276 dispersed
Cone17ag1086 Cone-Chr17:8091858 Cone20ag0903 Cone-Chr20:6532244 3.23E-201 dispersed
Cone20ag0900 Cone-Chr20:6520804 Cone20ag0903 Cone-Chr20:6532244 7.20E-292 dispersed
Cone20ag0901 Cone-Chr20:6523911 Cone20ag0903 Cone-Chr20:6532244 3.31E-91 dispersed
Cone20ag0903 Cone-Chr20:6532244 Cone2ag0556 Cone-Chr2:3146952 1.13E-137 dispersed
Cone20ag0902 Cone-Chr20:6524520 Cone20ag0903 Cone-Chr20:6532244 1.37E-159 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0903 - - - 0.0