Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0931 ATGGCGGCAGTGATGAAGCTGCATGGGCTACCCATGTCCACATGCACAACCCGTGTCCTGACATGTCTTCACGAAAAAGGAGTAGACTTTGAGCTCGTTCCTGTTAACCTCTTCACCGCTGAGCATAAACACCCTCCATTTCTCGCAAAGAATCCTTTTGGCCAGATTCCTGTGCTTGAAGACGGTGAACTCACTCTCTTTGAATCAAGAGCAATCTCAACCTACATTGCCGAGAAATACAAAGATTCCGGCACGGACCTACTCGGAATCAACCAAAATCCTAAGAAGGAAGAAACCGCCGCAGTATCAGCAACAGCGGCGGCCATAGTCAGAGTGTGGGTGGAGGTAGAATCACACCAATACAACCCAGCAATATCTCCTATAATCTACCAACACTTTGTGTCACCTCTTCAAGGCAATGAGCCAGACCAAGCGATAATCGATGCCCACTTAGAGAAACTAAGCAAAGTGCTTGATGTCTATGAAGCCAAGCTGGGTTTGACCAAATACCTTGCCGGAGATTTCTTTAGCCTTGCTGACCTTCACCACCTACCTTTCACCTTTTACTTCATGAAAACCCCTTGGGCTTCCTTGATAAATGACCATCCACGTGTCAAGGCTTGGTGGGATGATATTTCTTCTAGGTCTTCGTTTGAAAAAGTTTCTAAGGGTATGACTTTTAGTTCCGATAACGGTGCTGAGAAATAG 708 46.19 MAAVMKLHGLPMSTCTTRVLTCLHEKGVDFELVPVNLFTAEHKHPPFLAKNPFGQIPVLEDGELTLFESRAISTYIAEKYKDSGTDLLGINQNPKKEETAAVSATAAAIVRVWVEVESHQYNPAISPIIYQHFVSPLQGNEPDQAIIDAHLEKLSKVLDVYEAKLGLTKYLAGDFFSLADLHHLPFTFYFMKTPWASLINDHPRVKAWWDDISSRSSFEKVSKGMTFSSDNGAEK 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 6689664 6690597 + Conep20aG0096300.1 Cone20ag0931 460835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0931 235 SFLD Main (cytGST) 3 225 - -
Cone20ag0931 235 CDD GST_C_Phi 109 221 IPR034347 -
Cone20ag0931 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Cone20ag0931 235 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 103 235 IPR010987 -
Cone20ag0931 235 PANTHER GLUTATHIONE S-TRANSFERASE RHO 5 224 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Cone20ag0931 235 Pfam Glutathione S-transferase, C-terminal domain 126 215 IPR004046 -
Cone20ag0931 235 SUPERFAMILY Thioredoxin-like 4 84 IPR036249 -
Cone20ag0931 235 Gene3D Glutaredoxin 3 88 - -
Cone20ag0931 235 SUPERFAMILY GST C-terminal domain-like 105 221 IPR036282 -
Cone20ag0931 235 Gene3D - 102 222 - -
Cone20ag0931 235 SFLD Main.5: Phi-like 3 225 - -
Cone20ag0931 235 CDD GST_N_Phi 4 79 - -
Cone20ag0931 235 FunFam Glutathione S-transferase F2 4 88 - -
Cone20ag0931 235 Pfam Glutathione S-transferase, N-terminal domain 4 78 IPR004045 -
Cone20ag0931 235 FunFam Glutathione S-transferase F2 102 222 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0931 Cone-Chr20:6689664 Cone20ag0933 Cone-Chr20:6695594 5.80E-66 dispersed
Cone20ag0931 Cone-Chr20:6689664 Cone20ag0932 Cone-Chr20:6691400 5.37E-64 tandem
Cone17ag0503 Cone-Chr17:2495795 Cone20ag0931 Cone-Chr20:6689664 2.88E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0931 K00799 - vvi:100242506 332.798