Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0932 ATGCCAAGCATTAAGGTTTATGGAAGCCCTTTTTCTACAGCAACCTCCAGGGCTCTTGCCGTCCTTCATGAGAAGGAAATGGAGTATGAACTTGTTCCTGTGGACTTGAGAACTGGTGAGCATAAGAAGGAGCCCTTCATTTCAATCAATCCATTTGGTCAAGTTCCCGGTTTTGAAGATGGAGATCTAAAGCTCTTTGAATCCAGGGCAATCACACAGTACATTGCTCATGCTTATGCTGACAAAGGAACCAATTTGATAGCCCTTGAGCCTAAGAAAATGGCAGTAGTAGGAACATGGGTGGAGGTGGAGTCCCACCACTTCGACCAACCGGCATCGAAACTGACATGGGAGCTGGCCATAAAGCCCATGTTCGGAATGGGGGCACCGGATGCTGCCGTGGTGTCTGAAAACGAAGCCAAATTGGGTTCGGTTCTAGATGTGTATGAGAAGCAGCTAAGCAAAGCTAAATACTTGGCTGGTGATTTCTTCTCCTTGGCTGACCTTCATCATCTTCCCTGTTTGAGTTACGTGAGGGGGACTTCAGTTGACAATTTGATTGATTGTCGCCCACATGTTAAGGCCTGGGTGGATGAGATCTTGGCCAGACCAGCTTGGGTTAAAACGGCTGCCATGAGGGTCAAGCATGATTGA 654 47.71 MPSIKVYGSPFSTATSRALAVLHEKEMEYELVPVDLRTGEHKKEPFISINPFGQVPGFEDGDLKLFESRAITQYIAHAYADKGTNLIALEPKKMAVVGTWVEVESHHFDQPASKLTWELAIKPMFGMGAPDAAVVSENEAKLGSVLDVYEKQLSKAKYLAGDFFSLADLHHLPCLSYVRGTSVDNLIDCRPHVKAWVDEILARPAWVKTAAMRVKHD 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 6691400 6692629 + Conep20aG0096400.1 Cone20ag0932 460836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0932 217 SFLD Main.5: Phi-like 3 212 - -
Cone20ag0932 217 CDD GST_N_Phi 4 77 - -
Cone20ag0932 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Cone20ag0932 217 CDD GST_C_Phi 92 210 IPR034347 -
Cone20ag0932 217 PANTHER GLUTATHIONE S-TRANSFERASE RHO 5 212 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Cone20ag0932 217 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Cone20ag0932 217 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Cone20ag0932 217 FunFam Glutathione S-transferase F2 89 210 - -
Cone20ag0932 217 FunFam Glutathione S-transferase F2 3 87 - -
Cone20ag0932 217 Gene3D - 90 214 - -
Cone20ag0932 217 Pfam Glutathione S-transferase, C-terminal domain 118 204 IPR004046 -
Cone20ag0932 217 SFLD Main (cytGST) 3 212 - -
Cone20ag0932 217 Gene3D Glutaredoxin 3 87 - -
Cone20ag0932 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cone20ag0932 217 SUPERFAMILY GST C-terminal domain-like 74 215 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0503 Cone-Chr17:2495795 Cone20ag0932 Cone-Chr20:6691400 1.77E-20 dispersed
Cone20ag0053 Cone-Chr20:254347 Cone20ag0932 Cone-Chr20:6691400 4.84E-58 dispersed
Cone20ag0932 Cone-Chr20:6691400 Cone20ag0934 Cone-Chr20:6704638 5.74E-130 dispersed
Cone20ag0931 Cone-Chr20:6689664 Cone20ag0932 Cone-Chr20:6691400 5.37E-64 tandem
Cone20ag0932 Cone-Chr20:6691400 Cone20ag0933 Cone-Chr20:6695594 8.26E-137 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0932 K00799 - gmx:100799868 286.189