Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0933 ATGGCATGCATCAAGATTCATGGAAGCCCTTTTTCCACAGCAACCTCGAGGGTTCTTTGTGCTCTTCATGAGAAAGACTTGGAGTATGAGCTTGTTCGAGTGGACTTGAGAATCGGTGAACATAAGAAGGAACCATTCATTTCCATCAACCCATTTGGTCAAGTTCCTGGTTTAGAAGATGGAGATCTAAAGCTCTTTGAATCCAGAGCAATCACACAATACCTTGCCCACGCTTATGCTGACAAGGGAACCAATTTGATAGCCCTAGATCCGAAGAAGATGGCATTAGTAGGAACATGGGTGGAAGTTGAAGCCCACCACTTCGACCCACCAGCATCAAAACTGACATGGGAGCTGGCCGCAAAGCCCTTGTTTAATATGGGCCCATCAGACACTGCAGTGGTGGAGGAAAACTTAGCCAAACTGGCATCAGTTCTGGATGTGTATGAAAAGCAGCTAAGCAAGTCAAAGTACTTGGCTGGTGATTTCTTCTCCTTGGCAGATCTTCATCATCTTCCCAATCTGAGTTACGTGAGAGGAACAGCAGTAGATGAGTTGATTGATTGTCGCCCACATGTTAAGGCCTGGGTTGATGACATCCTGTCGAGACCAGCTTGGGTTAAAACCGCTGATATGAGAGTCAAGCATGATTAA 654 45.87 MACIKIHGSPFSTATSRVLCALHEKDLEYELVRVDLRIGEHKKEPFISINPFGQVPGLEDGDLKLFESRAITQYLAHAYADKGTNLIALDPKKMALVGTWVEVEAHHFDPPASKLTWELAAKPLFNMGPSDTAVVEENLAKLASVLDVYEKQLSKSKYLAGDFFSLADLHHLPNLSYVRGTAVDELIDCRPHVKAWVDDILSRPAWVKTADMRVKHD 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 6695594 6702884 + Conep20aG0096500.1 Cone20ag0933 460837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0933 217 CDD GST_N_Phi 4 77 - -
Cone20ag0933 217 FunFam Glutathione S-transferase F2 3 87 - -
Cone20ag0933 217 Pfam Glutathione S-transferase, N-terminal domain 10 76 IPR004045 -
Cone20ag0933 217 Gene3D Glutaredoxin 2 87 - -
Cone20ag0933 217 CDD GST_C_Phi 92 210 IPR034347 -
Cone20ag0933 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Cone20ag0933 217 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Cone20ag0933 217 SFLD Main.5: Phi-like 1 212 - -
Cone20ag0933 217 SUPERFAMILY Thioredoxin-like 2 83 IPR036249 -
Cone20ag0933 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cone20ag0933 217 FunFam Glutathione S-transferase F2 89 210 - -
Cone20ag0933 217 Pfam Glutathione S-transferase, C-terminal domain 123 204 IPR004046 -
Cone20ag0933 217 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 212 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Cone20ag0933 217 Gene3D - 90 214 - -
Cone20ag0933 217 SUPERFAMILY GST C-terminal domain-like 74 215 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0505 Cone-Chr17:2508306 Cone20ag0933 Cone-Chr20:6695594 4.38E-157 dispersed
Cone20ag0931 Cone-Chr20:6689664 Cone20ag0933 Cone-Chr20:6695594 5.80E-66 dispersed
Cone20ag0933 Cone-Chr20:6695594 Cone4ag0862 Cone-Chr4:5891592 4.84E-57 dispersed
Cone20ag0932 Cone-Chr20:6691400 Cone20ag0933 Cone-Chr20:6695594 8.26E-137 tandem
Cone20ag0933 Cone-Chr20:6695594 Cone20ag0934 Cone-Chr20:6704638 2.27E-120 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0933 K00799 - csv:101212771 284.263