Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag0934 | ATGGCATGCATTAAGGTTCATGGAACCCCATTCTCCCCAGCAACAGCGAGGGCTCTTTGCGTCCTTCTTGAGAAAGAGTTGGAATATGAGCTTGTCCCTGTGGACTTGAGATCTGGCGAGCATAAGAAGGAACCCTTCATTTCTATCAACCCATTTGGTCAAGTTCCCGGTTTTGAAGATGCAGACCTCAAGCTCTTTGAATCCAGGGCGATCACTCAATACATTGCTCATGCTTATGCCGACAAAGGAACCAATTTGATAGCCCTTGAACCAAAGAAAATGGCAGTAGTAGGAACATGGGTGGAGGTGGAAGCGCACCACTTCGACCAACCAGCATCAAAACTGACATGGGAGCTGGCCATAAAGCCCATGTTCGGAATGGGCTCCCCGGATGCGGCAGTGGTGGCGGAAAACGAAGCCAAATTGGGATCGGTTCTAGATGTGTATGAAAAGCAGCTATGCAAAGAAAAATACTTGGCTGGTGATTTCTACTCCTTGGCAGATGTTCATCATGTTCCTCATTTGAGCTACTTGATAGGGACTGAAGCGAAGAAGTTGTTTGAGTCCCGCCCGCGAGTTAACGCATGGGTGGGTGAGATTTTGGCGAGACCAGCTTCCACTAAAGTGGTCGGGATGAGAGTTAAGCACTGA | 651 | 48.54 | MACIKVHGTPFSPATARALCVLLEKELEYELVPVDLRSGEHKKEPFISINPFGQVPGFEDADLKLFESRAITQYIAHAYADKGTNLIALEPKKMAVVGTWVEVEAHHFDQPASKLTWELAIKPMFGMGSPDAAVVAENEAKLGSVLDVYEKQLCKEKYLAGDFYSLADVHHVPHLSYLIGTEAKKLFESRPRVNAWVGEILARPASTKVVGMRVKH | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 6704638 | 6705944 | + | Conep20aG0096600.1 | Cone20ag0934 | 460838 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag0934 | 216 | Pfam | Glutathione S-transferase, C-terminal domain | 118 | 204 | IPR004046 | - | |
Cone20ag0934 | 216 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
Cone20ag0934 | 216 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 216 | IPR010987 | - | |
Cone20ag0934 | 216 | CDD | GST_C_Phi | 92 | 210 | IPR034347 | - | |
Cone20ag0934 | 216 | SFLD | Main.5: Phi-like | 1 | 212 | - | - | |
Cone20ag0934 | 216 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 1 | 212 | - | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER) | |
Cone20ag0934 | 216 | SFLD | Glutathione Transferase (cytosolic) | 1 | 212 | IPR040079 | - | |
Cone20ag0934 | 216 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 2 | 83 | IPR004045 | - | |
Cone20ag0934 | 216 | SUPERFAMILY | Thioredoxin-like | 2 | 83 | IPR036249 | - | |
Cone20ag0934 | 216 | SUPERFAMILY | GST C-terminal domain-like | 74 | 214 | IPR036282 | - | |
Cone20ag0934 | 216 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Cone20ag0934 | 216 | FunFam | Glutathione S-transferase F2 | 3 | 87 | - | - | |
Cone20ag0934 | 216 | Gene3D | - | 90 | 214 | - | - | |
Cone20ag0934 | 216 | FunFam | Glutathione S-transferase F2 | 89 | 210 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag0506 | Cone-Chr17:2510457 | Cone20ag0934 | Cone-Chr20:6704638 | 1.71E-149 | dispersed | |
Cone17ag0513 | Cone-Chr17:2535745 | Cone20ag0934 | Cone-Chr20:6704638 | 8.30E-121 | dispersed | |
Cone20ag0932 | Cone-Chr20:6691400 | Cone20ag0934 | Cone-Chr20:6704638 | 5.74E-130 | dispersed | |
Cone20ag0934 | Cone-Chr20:6704638 | Cone4ag0862 | Cone-Chr4:5891592 | 1.97E-53 | dispersed | |
Cone20ag0934 | Cone-Chr20:6704638 | Cone20ag0938 | Cone-Chr20:6729633 | 1.20E-16 | proximal | |
Cone20ag0934 | Cone-Chr20:6704638 | Cone20ag0939 | Cone-Chr20:6738860 | 6.76E-39 | proximal | |
Cone20ag0933 | Cone-Chr20:6695594 | Cone20ag0934 | Cone-Chr20:6704638 | 2.27E-120 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag0934 | K00799 | - | csv:101212771 | 289.271 |