Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0934 ATGGCATGCATTAAGGTTCATGGAACCCCATTCTCCCCAGCAACAGCGAGGGCTCTTTGCGTCCTTCTTGAGAAAGAGTTGGAATATGAGCTTGTCCCTGTGGACTTGAGATCTGGCGAGCATAAGAAGGAACCCTTCATTTCTATCAACCCATTTGGTCAAGTTCCCGGTTTTGAAGATGCAGACCTCAAGCTCTTTGAATCCAGGGCGATCACTCAATACATTGCTCATGCTTATGCCGACAAAGGAACCAATTTGATAGCCCTTGAACCAAAGAAAATGGCAGTAGTAGGAACATGGGTGGAGGTGGAAGCGCACCACTTCGACCAACCAGCATCAAAACTGACATGGGAGCTGGCCATAAAGCCCATGTTCGGAATGGGCTCCCCGGATGCGGCAGTGGTGGCGGAAAACGAAGCCAAATTGGGATCGGTTCTAGATGTGTATGAAAAGCAGCTATGCAAAGAAAAATACTTGGCTGGTGATTTCTACTCCTTGGCAGATGTTCATCATGTTCCTCATTTGAGCTACTTGATAGGGACTGAAGCGAAGAAGTTGTTTGAGTCCCGCCCGCGAGTTAACGCATGGGTGGGTGAGATTTTGGCGAGACCAGCTTCCACTAAAGTGGTCGGGATGAGAGTTAAGCACTGA 651 48.54 MACIKVHGTPFSPATARALCVLLEKELEYELVPVDLRSGEHKKEPFISINPFGQVPGFEDADLKLFESRAITQYIAHAYADKGTNLIALEPKKMAVVGTWVEVEAHHFDQPASKLTWELAIKPMFGMGSPDAAVVAENEAKLGSVLDVYEKQLCKEKYLAGDFYSLADVHHVPHLSYLIGTEAKKLFESRPRVNAWVGEILARPASTKVVGMRVKH 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 6704638 6705944 + Conep20aG0096600.1 Cone20ag0934 460838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0934 216 Pfam Glutathione S-transferase, C-terminal domain 118 204 IPR004046 -
Cone20ag0934 216 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Cone20ag0934 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 216 IPR010987 -
Cone20ag0934 216 CDD GST_C_Phi 92 210 IPR034347 -
Cone20ag0934 216 SFLD Main.5: Phi-like 1 212 - -
Cone20ag0934 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 212 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Cone20ag0934 216 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Cone20ag0934 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cone20ag0934 216 SUPERFAMILY Thioredoxin-like 2 83 IPR036249 -
Cone20ag0934 216 SUPERFAMILY GST C-terminal domain-like 74 214 IPR036282 -
Cone20ag0934 216 Gene3D Glutaredoxin 1 87 - -
Cone20ag0934 216 FunFam Glutathione S-transferase F2 3 87 - -
Cone20ag0934 216 Gene3D - 90 214 - -
Cone20ag0934 216 FunFam Glutathione S-transferase F2 89 210 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0506 Cone-Chr17:2510457 Cone20ag0934 Cone-Chr20:6704638 1.71E-149 dispersed
Cone17ag0513 Cone-Chr17:2535745 Cone20ag0934 Cone-Chr20:6704638 8.30E-121 dispersed
Cone20ag0932 Cone-Chr20:6691400 Cone20ag0934 Cone-Chr20:6704638 5.74E-130 dispersed
Cone20ag0934 Cone-Chr20:6704638 Cone4ag0862 Cone-Chr4:5891592 1.97E-53 dispersed
Cone20ag0934 Cone-Chr20:6704638 Cone20ag0938 Cone-Chr20:6729633 1.20E-16 proximal
Cone20ag0934 Cone-Chr20:6704638 Cone20ag0939 Cone-Chr20:6738860 6.76E-39 proximal
Cone20ag0933 Cone-Chr20:6695594 Cone20ag0934 Cone-Chr20:6704638 2.27E-120 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0934 K00799 - csv:101212771 289.271