Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0967 ATGGCTGGAGATACTACTCATGGCCCTAGCTCGAGGACTCTTCTTTGCAATGCCGGAGCTGGTGCTGCTGCTGGAGTTCTTGCTGCTACATTTGTGTGCCCTTTAGATGTTATCAAAACAAGGTTTCAGGTTCATGGAATCCCAAAGATTGGTAATGGAAGTGCTAAAGGAAGCCTTATAGTTGGTAGCTTGGAACAAATTTTTCAGAAAGAAGGCCTTCGTGGAATGTATCGTGGGCTCTCACCCACCATCCTGGCATTGCTTCCTAATTGGGCAGTTTATTTTACAATTTATGAGCAGCTCAAATGCGTCCTTTGCTCCAAAGATGAAAATCATAAACTTTCAGTTGGTTCTCATATGATAGCTGCTTCTGGTGCTGGAGCTGCAACAACCTTTGTTACAAATCCTCTTTGGGTTGTAAAGACTAGGCTTCAAACCCAAGGAATGAGACCAGGTGTTGTCCCTTATACAGGTACACTGTCTGCTTTGAGAAGGATAGCCCGTGTCGAAGGCATTCGAGGATTGTACAGTGGTCTTGTGCCTGCTATGGCTGGTATAAGTCATGTTGCAATCCAATTTCCAACATACGAGAAAATAAAAACTTATTTGGCCAGTAAAGATAACACTACAGCGGATAAACTCAGTGCAACTAATGTAGCCGTCGCCTCATCCATCTCCAAAATATTTGCATCCTCTTTGACTTATCCACATGAGGTGGTCCGGTCAAGGCTACAAGAACAAGGGCACCATTCTGAAAAACGGTATTCTGGTGTAATTGATTGCGTTAAGAAAGTTTTCCAGCAAGAGGGTCTACCAGGTTTTTACCGTGGGTGTGCAACTAATCTTCTAAGGACAACCCCAGCAGCTGTAATAACATTTACCAGCTTTGAAATGATTCACCGATTTCTAGTCACTCTATACCCTCCTGATCCACAGCCTCACATATTGTGA 951 43.64 MAGDTTHGPSSRTLLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGIPKIGNGSAKGSLIVGSLEQIFQKEGLRGMYRGLSPTILALLPNWAVYFTIYEQLKCVLCSKDENHKLSVGSHMIAASGAGAATTFVTNPLWVVKTRLQTQGMRPGVVPYTGTLSALRRIARVEGIRGLYSGLVPAMAGISHVAIQFPTYEKIKTYLASKDNTTADKLSATNVAVASSISKIFASSLTYPHEVVRSRLQEQGHHSEKRYSGVIDCVKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVTLYPPDPQPHIL 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 6902718 6905942 - Conep20aG0100200.1 Cone20ag0967 460871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0967 316 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 305 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(PANTHER)|GO:0055085(InterPro)
Cone20ag0967 316 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 110 - -
Cone20ag0967 316 SUPERFAMILY Mitochondrial carrier 14 298 IPR023395 -
Cone20ag0967 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 114 202 IPR018108 -
Cone20ag0967 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 302 IPR018108 -
Cone20ag0967 316 FunFam NAD+ transporter 111 307 - -
Cone20ag0967 316 PRINTS Mitochondrial carrier protein signature 30 44 IPR002067 GO:0055085(InterPro)
Cone20ag0967 316 PRINTS Mitochondrial carrier protein signature 17 30 IPR002067 GO:0055085(InterPro)
Cone20ag0967 316 PRINTS Mitochondrial carrier protein signature 129 147 IPR002067 GO:0055085(InterPro)
Cone20ag0967 316 PRINTS Mitochondrial carrier protein signature 223 245 IPR002067 GO:0055085(InterPro)
Cone20ag0967 316 PRINTS Mitochondrial carrier protein signature 79 99 IPR002067 GO:0055085(InterPro)
Cone20ag0967 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 104 IPR018108 -
Cone20ag0967 316 Gene3D Mitochondrial carrier domain 1 109 IPR023395 -
Cone20ag0967 316 Gene3D Mitochondrial carrier domain 110 306 IPR023395 -
Cone20ag0967 316 Pfam Mitochondrial carrier protein 214 304 IPR018108 -
Cone20ag0967 316 Pfam Mitochondrial carrier protein 13 106 IPR018108 -
Cone20ag0967 316 Pfam Mitochondrial carrier protein 113 205 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0967 Cone-Chr20:6902718 Cone6ag0430 Cone-Chr6:2086342 1.19E-142 dispersed
Cone17ag0445 Cone-Chr17:2088496 Cone20ag0967 Cone-Chr20:6902718 2.10E-216 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0967 K15115 - vvi:100258843 534.643