Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag1003 | ATGTCCGTGCCAGAAGTTTTCATCAACGCCGGTACGCTGAAAAATGGCCATTGCTTTTTCCTGAAGAAATTGGTTTTATTCTGCTTTGTGCTATCAATCACTAGTGCTGATCTACCTATATCTCCTAGTGGAGCTCAATTGGATGCAACTGCCATTCCTCATCTACCTCTTCCTGCAAACTTTCCAGTACATCAATGGCACTGGAGGAAACATTTTTCACCACGTGGTGCACCAATATCTAATCTTCCCTATTATGACCCTCTGCTAACTTCTGGTCATCCCTCTGCTAGCTCACATTTTTCAAAACTATATGTGAAGAGGAATGTATTAACACCACCAGTTTTAGGCTCTGAGAAGATTGCCCCAATACAGTCTAGTGCTGGTTCTGTACCTTCTAGTTCATCTCAGCCACCGTTATCTCCCTACTCATCCGATTGTTGCACTCATGACATGGTACTGAAACGGGGGAGTCAGGGATGTGATTGTGCATACCCTATAAAGCTTGATCTTCTCCTTTTAAATGTTTCAGAAAATCCAAATTGGAATCTGTTTATGCAAGAATTAGCTTCCCAGCTTGGTTTGCAAGATTCTCAGATTGAGCTGATAAACTTTTATGTAATCAGCTTGTCGAAGTTAAATATCTCAATGGATGTTACTCCACTTATGGGGTTCAGTTTCTCTGCCATTGAGGCATCAGCGATAAACACTTCACTTGCCATGCATAGGGTTCGTCTAAACCCTACACTAGTGGGTGATTATAAACTTCTCAACTTAACCTGGTTTAAGCCGCCACCTCCTTCTCAAGCTCCTCTCAGTGCTGCATCACCTGTGCCCGTCCCAAGGCACAAGTCCCCAGCTTCCACATCTCCTAGTGCTTCAGATAATAAGAAACACACAAATGTGATCCTTTTTATTGGTATAGGAGTTGGCCTCTTACTTGTTGCCATACTGTTCTTGCTAATATTTTGTTTCTGCGCATACTGTCAAAGGAAAAATAAGGCATCTCCAGTAATAACTGAAAAAGTGATAGGTGCGAATGCGGTTCCGGTAGTAGGATCTCTTCGCCACCCAACCAGCACAAGGTTTCTATCTTATGAAGAACTCAAAGAAGCAACCAACAACTTCGAACCTGCAAGTGTACTTGGAGAAGGTGGTTTCGGTAGAGTTTTCAAAGGTGTATTGAGTGATGGTACACCAGTAGCCATCAAGAGACTTTCTAATGGAGGGAAACAAGGAGATAAAGAATTTCTTGTCGAGGTTGAAATGCTCAGCAGGTTGCATCATCGTAATCTTGTGAAACTTGTTGGTTACTATAGCTGCCGAGATTCTTCACAAAACCTACTTTGCTATGAGCTTGTCCCCAATGGAAGTTTGGAGGCTTGGCTACATGGACCCCTTGGTTTAAGCTGTCCTTTGGACTGGGAAGCCAGAATGAAGATTGCCCTTGACGCTGCTCGAGGACTTGCTTATCTACATGAAGATTCACAGCCCTGTGTTATTCACAGAGACTTCAAGGCATCAAACATATTGCTCGAGAAAAACTTTACTGCCAAAGTTTCAGATTTTGGCCTCGCTAAACAGGCTCCTGAAGGCAGAGGAAATCACCTGTCAACTCGTGTAATGGGGACATTTGGATATGTAGCTCCCGAGTATGCAATGACAGGACATCTACTAGTTAAAAGTGATGTTTATAGTTATGGAGTTGTCCTCCTTGAATTGCTGACTGGAAGGAGGCCTGTCGATATGTCACAACCAGCTGGGCAGGAAAACCTCGTCAGTTGGGCAAGGCCGATTCTTCGAGACAAGGATAGGCTGGAAGAACTTGCTGATCCAAGGCTAGGAGGAAAGTACCCAAAGGAAGATTTTCTTCGGGTGTGTACAATAGCTGCGGCTTGTGTTTCCCCTGAGGTAAATCAACGGCCCAAAATGGGAGAAGTAGTACAGTCGCTTAAAATGGTACAAAGAGTCACAGAGTATCAAGAACCCACTTTACCACCCTCCAACAACAGCAGACCAAACCTCAGACCGTCTTCAACTACATTCGAGTCTGATAGAACATCATCCATTTTCTCATCTGGTCCTTATTCCGGTCCTAGTAATTTTGGCGCAGAGAATTTCTCTAGGACTGGAGTTTTCTCTGAAGATCTTCACGAAGGGCGATGA | 2163 | 43.83 | MSVPEVFINAGTLKNGHCFFLKKLVLFCFVLSITSADLPISPSGAQLDATAIPHLPLPANFPVHQWHWRKHFSPRGAPISNLPYYDPLLTSGHPSASSHFSKLYVKRNVLTPPVLGSEKIAPIQSSAGSVPSSSSQPPLSPYSSDCCTHDMVLKRGSQGCDCAYPIKLDLLLLNVSENPNWNLFMQELASQLGLQDSQIELINFYVISLSKLNISMDVTPLMGFSFSAIEASAINTSLAMHRVRLNPTLVGDYKLLNLTWFKPPPPSQAPLSAASPVPVPRHKSPASTSPSASDNKKHTNVILFIGIGVGLLLVAILFLLIFCFCAYCQRKNKASPVITEKVIGANAVPVVGSLRHPTSTRFLSYEELKEATNNFEPASVLGEGGFGRVFKGVLSDGTPVAIKRLSNGGKQGDKEFLVEVEMLSRLHHRNLVKLVGYYSCRDSSQNLLCYELVPNGSLEAWLHGPLGLSCPLDWEARMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLEKNFTAKVSDFGLAKQAPEGRGNHLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPAGQENLVSWARPILRDKDRLEELADPRLGGKYPKEDFLRVCTIAAACVSPEVNQRPKMGEVVQSLKMVQRVTEYQEPTLPPSNNSRPNLRPSSTTFESDRTSSIFSSGPYSGPSNFGAENFSRTGVFSEDLHEGR | 720 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 7052299 | 7057159 | - | Conep20aG0103800.1 | Cone20ag1003 | 460907 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag1003 | 720 | PANTHER | OS01G0750732 PROTEIN | 146 | 688 | IPR050885 | - | |
Cone20ag1003 | 720 | ProSiteProfiles | Protein kinase domain profile. | 375 | 664 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone20ag1003 | 720 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 453 | 665 | - | - | |
Cone20ag1003 | 720 | Gene3D | Phosphorylase Kinase; domain 1 | 355 | 452 | - | - | |
Cone20ag1003 | 720 | Gene3D | Transferase(Phosphotransferase) domain 1 | 453 | 664 | - | - | |
Cone20ag1003 | 720 | MobiDBLite | consensus disorder prediction | 659 | 707 | - | - | |
Cone20ag1003 | 720 | SUPERFAMILY | Protein kinase-like (PK-like) | 352 | 652 | IPR011009 | - | |
Cone20ag1003 | 720 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 355 | 452 | - | - | |
Cone20ag1003 | 720 | ProSitePatterns | Protein kinases ATP-binding region signature. | 381 | 403 | IPR017441 | GO:0005524(InterPro) | |
Cone20ag1003 | 720 | MobiDBLite | consensus disorder prediction | 659 | 720 | - | - | |
Cone20ag1003 | 720 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 499 | 511 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone20ag1003 | 720 | Pfam | Protein tyrosine and serine/threonine kinase | 379 | 650 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone20ag1003 | 720 | MobiDBLite | consensus disorder prediction | 269 | 295 | - | - | |
Cone20ag1003 | 720 | CDD | STKc_IRAK | 381 | 651 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag1003 | Cone-Chr20:7052299 | Cone7ag1127 | Cone-Chr7:8486782 | 8.71E-117 | dispersed | |
Cone8ag1197 | Cone-Chr8:10205338 | Cone20ag1003 | Cone-Chr20:7052299 | 3.99E-87 | dispersed | |
Cone10ag0838 | Cone-Chr10:4250465 | Cone20ag1003 | Cone-Chr20:7052299 | 1.44E-85 | wgd | |
Cone11ag0700 | Cone-Chr11:4775332 | Cone20ag1003 | Cone-Chr20:7052299 | 0 | wgd | |
Cone17ag0409 | Cone-Chr17:1940575 | Cone20ag1003 | Cone-Chr20:7052299 | 0 | wgd | |
Cone18ag0752 | Cone-Chr18:4146543 | Cone20ag1003 | Cone-Chr20:7052299 | 1.08e-316 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82561 | PF12697 | Abhydrolase_6 | 9.40E-14 | CL0028 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag1003 | - | - | - | 0.0 |