Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1003 ATGTCCGTGCCAGAAGTTTTCATCAACGCCGGTACGCTGAAAAATGGCCATTGCTTTTTCCTGAAGAAATTGGTTTTATTCTGCTTTGTGCTATCAATCACTAGTGCTGATCTACCTATATCTCCTAGTGGAGCTCAATTGGATGCAACTGCCATTCCTCATCTACCTCTTCCTGCAAACTTTCCAGTACATCAATGGCACTGGAGGAAACATTTTTCACCACGTGGTGCACCAATATCTAATCTTCCCTATTATGACCCTCTGCTAACTTCTGGTCATCCCTCTGCTAGCTCACATTTTTCAAAACTATATGTGAAGAGGAATGTATTAACACCACCAGTTTTAGGCTCTGAGAAGATTGCCCCAATACAGTCTAGTGCTGGTTCTGTACCTTCTAGTTCATCTCAGCCACCGTTATCTCCCTACTCATCCGATTGTTGCACTCATGACATGGTACTGAAACGGGGGAGTCAGGGATGTGATTGTGCATACCCTATAAAGCTTGATCTTCTCCTTTTAAATGTTTCAGAAAATCCAAATTGGAATCTGTTTATGCAAGAATTAGCTTCCCAGCTTGGTTTGCAAGATTCTCAGATTGAGCTGATAAACTTTTATGTAATCAGCTTGTCGAAGTTAAATATCTCAATGGATGTTACTCCACTTATGGGGTTCAGTTTCTCTGCCATTGAGGCATCAGCGATAAACACTTCACTTGCCATGCATAGGGTTCGTCTAAACCCTACACTAGTGGGTGATTATAAACTTCTCAACTTAACCTGGTTTAAGCCGCCACCTCCTTCTCAAGCTCCTCTCAGTGCTGCATCACCTGTGCCCGTCCCAAGGCACAAGTCCCCAGCTTCCACATCTCCTAGTGCTTCAGATAATAAGAAACACACAAATGTGATCCTTTTTATTGGTATAGGAGTTGGCCTCTTACTTGTTGCCATACTGTTCTTGCTAATATTTTGTTTCTGCGCATACTGTCAAAGGAAAAATAAGGCATCTCCAGTAATAACTGAAAAAGTGATAGGTGCGAATGCGGTTCCGGTAGTAGGATCTCTTCGCCACCCAACCAGCACAAGGTTTCTATCTTATGAAGAACTCAAAGAAGCAACCAACAACTTCGAACCTGCAAGTGTACTTGGAGAAGGTGGTTTCGGTAGAGTTTTCAAAGGTGTATTGAGTGATGGTACACCAGTAGCCATCAAGAGACTTTCTAATGGAGGGAAACAAGGAGATAAAGAATTTCTTGTCGAGGTTGAAATGCTCAGCAGGTTGCATCATCGTAATCTTGTGAAACTTGTTGGTTACTATAGCTGCCGAGATTCTTCACAAAACCTACTTTGCTATGAGCTTGTCCCCAATGGAAGTTTGGAGGCTTGGCTACATGGACCCCTTGGTTTAAGCTGTCCTTTGGACTGGGAAGCCAGAATGAAGATTGCCCTTGACGCTGCTCGAGGACTTGCTTATCTACATGAAGATTCACAGCCCTGTGTTATTCACAGAGACTTCAAGGCATCAAACATATTGCTCGAGAAAAACTTTACTGCCAAAGTTTCAGATTTTGGCCTCGCTAAACAGGCTCCTGAAGGCAGAGGAAATCACCTGTCAACTCGTGTAATGGGGACATTTGGATATGTAGCTCCCGAGTATGCAATGACAGGACATCTACTAGTTAAAAGTGATGTTTATAGTTATGGAGTTGTCCTCCTTGAATTGCTGACTGGAAGGAGGCCTGTCGATATGTCACAACCAGCTGGGCAGGAAAACCTCGTCAGTTGGGCAAGGCCGATTCTTCGAGACAAGGATAGGCTGGAAGAACTTGCTGATCCAAGGCTAGGAGGAAAGTACCCAAAGGAAGATTTTCTTCGGGTGTGTACAATAGCTGCGGCTTGTGTTTCCCCTGAGGTAAATCAACGGCCCAAAATGGGAGAAGTAGTACAGTCGCTTAAAATGGTACAAAGAGTCACAGAGTATCAAGAACCCACTTTACCACCCTCCAACAACAGCAGACCAAACCTCAGACCGTCTTCAACTACATTCGAGTCTGATAGAACATCATCCATTTTCTCATCTGGTCCTTATTCCGGTCCTAGTAATTTTGGCGCAGAGAATTTCTCTAGGACTGGAGTTTTCTCTGAAGATCTTCACGAAGGGCGATGA 2163 43.83 MSVPEVFINAGTLKNGHCFFLKKLVLFCFVLSITSADLPISPSGAQLDATAIPHLPLPANFPVHQWHWRKHFSPRGAPISNLPYYDPLLTSGHPSASSHFSKLYVKRNVLTPPVLGSEKIAPIQSSAGSVPSSSSQPPLSPYSSDCCTHDMVLKRGSQGCDCAYPIKLDLLLLNVSENPNWNLFMQELASQLGLQDSQIELINFYVISLSKLNISMDVTPLMGFSFSAIEASAINTSLAMHRVRLNPTLVGDYKLLNLTWFKPPPPSQAPLSAASPVPVPRHKSPASTSPSASDNKKHTNVILFIGIGVGLLLVAILFLLIFCFCAYCQRKNKASPVITEKVIGANAVPVVGSLRHPTSTRFLSYEELKEATNNFEPASVLGEGGFGRVFKGVLSDGTPVAIKRLSNGGKQGDKEFLVEVEMLSRLHHRNLVKLVGYYSCRDSSQNLLCYELVPNGSLEAWLHGPLGLSCPLDWEARMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLEKNFTAKVSDFGLAKQAPEGRGNHLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPAGQENLVSWARPILRDKDRLEELADPRLGGKYPKEDFLRVCTIAAACVSPEVNQRPKMGEVVQSLKMVQRVTEYQEPTLPPSNNSRPNLRPSSTTFESDRTSSIFSSGPYSGPSNFGAENFSRTGVFSEDLHEGR 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 7052299 7057159 - Conep20aG0103800.1 Cone20ag1003 460907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1003 720 PANTHER OS01G0750732 PROTEIN 146 688 IPR050885 -
Cone20ag1003 720 ProSiteProfiles Protein kinase domain profile. 375 664 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone20ag1003 720 FunFam Receptor-like serine/threonine-protein kinase ALE2 453 665 - -
Cone20ag1003 720 Gene3D Phosphorylase Kinase; domain 1 355 452 - -
Cone20ag1003 720 Gene3D Transferase(Phosphotransferase) domain 1 453 664 - -
Cone20ag1003 720 MobiDBLite consensus disorder prediction 659 707 - -
Cone20ag1003 720 SUPERFAMILY Protein kinase-like (PK-like) 352 652 IPR011009 -
Cone20ag1003 720 FunFam Receptor-like serine/threonine-protein kinase ALE2 355 452 - -
Cone20ag1003 720 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524(InterPro)
Cone20ag1003 720 MobiDBLite consensus disorder prediction 659 720 - -
Cone20ag1003 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone20ag1003 720 Pfam Protein tyrosine and serine/threonine kinase 379 650 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone20ag1003 720 MobiDBLite consensus disorder prediction 269 295 - -
Cone20ag1003 720 CDD STKc_IRAK 381 651 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag1003 Cone-Chr20:7052299 Cone7ag1127 Cone-Chr7:8486782 8.71E-117 dispersed
Cone8ag1197 Cone-Chr8:10205338 Cone20ag1003 Cone-Chr20:7052299 3.99E-87 dispersed
Cone10ag0838 Cone-Chr10:4250465 Cone20ag1003 Cone-Chr20:7052299 1.44E-85 wgd
Cone11ag0700 Cone-Chr11:4775332 Cone20ag1003 Cone-Chr20:7052299 0 wgd
Cone17ag0409 Cone-Chr17:1940575 Cone20ag1003 Cone-Chr20:7052299 0 wgd
Cone18ag0752 Cone-Chr18:4146543 Cone20ag1003 Cone-Chr20:7052299 1.08e-316 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82561 PF12697 Abhydrolase_6 9.40E-14 CL0028 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1003 - - - 0.0