Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag1024 | ATGGTAGCAGAAGCAGAGGTGGTTATGTGTCAACAGAGCGTGCCGATTAGGTACTTTGGTAAGGGAGCTCATCCTCATAATCAGAGTCTTGTTCATGAGGTGGAAGATGTTGTAGCTTCGAGTTTCGATCAGCTACGAGCTTCCGACTCAGTTGCAGTTGATTTATCGAGCTCCGATTCGGCTGTTAAACCTGCCGAGAAAATTCTAGATCCGGGTCTTGAATCTGATATCATTCAGTATCTTCCTTGCATCCGTTCTGGTAGCTATGCTGATATTGGACCCAGAAGACACATGGAAGATGAGCATATACGGATAGACGACTTATGTTCCCATTTAGGATCACTCTTCAACTTCCCCAAACCAAGTGCACTTTTCGGGGTATTTGACGGGCATGGAGGACCTGAAGCAGCAGCTTATATTCGAAAAAATGTCATCAGACTCCTTTTTGAAGATACAAACTTTCCTCAAACATCTGAGGTTGATGAAATCTTCTTAGAAGAGCTTGAGAACTCCCTCCACAAGTCATATCTTCTGGCCGATCAAGCTCTTGCCAATGATCATACTGTGAGTCGTTCCTCTGGCACTACAGCACTGACTGCTCTTGTATTTGGAAGGATTCTAATAGTGGCCAATGCTGGTGATTGTCGAGCAGTTCTCTCTCATAAAGGAGAAGCCATAGACATGTCTCAAGACCATAGACCAATCCGTCTCTCAGAAAGAAGGCGGGTGGAAGAATTGGGCGCATATATAGATGATGGCTATCTTAACGGTGTTTTATCAGTAACCAGAGCATTAGGGGATTGGGACATGAAATTCCCTCTAGACTCTCCTTCCCCTCTTATTCCAGACCCAGAATGCAAGCAGATTATTCTGACTAAAGAAGATGAGTTCCTAATCATAGCCTGTGACGGGGTTTGGGATGTGTTGTCAAGTCAACAAGCGGTCAACATTGTCCGTAGAGGACTTAGATGCCATGACGACCCTGAGCAGTGTGCTAGAGACCTTGTCATGGCTGCTTTGAGACTCAATACATTTGATAATCTAACGGTCATTGTTGTTTGCTTCTCTAGCCTTGATGATAGGGAAGAGGCATCTAGGGAGAGGAAATTGAGATGCTGTAGCCTCTCTGCGGAGGCCCTTTGTAACTTGAGGAGCTGGTTGGACAATTGA | 1170 | 45.13 | MVAEAEVVMCQQSVPIRYFGKGAHPHNQSLVHEVEDVVASSFDQLRASDSVAVDLSSSDSAVKPAEKILDPGLESDIIQYLPCIRSGSYADIGPRRHMEDEHIRIDDLCSHLGSLFNFPKPSALFGVFDGHGGPEAAAYIRKNVIRLLFEDTNFPQTSEVDEIFLEELENSLHKSYLLADQALANDHTVSRSSGTTALTALVFGRILIVANAGDCRAVLSHKGEAIDMSQDHRPIRLSERRRVEELGAYIDDGYLNGVLSVTRALGDWDMKFPLDSPSPLIPDPECKQIILTKEDEFLIIACDGVWDVLSSQQAVNIVRRGLRCHDDPEQCARDLVMAALRLNTFDNLTVIVVCFSSLDDREEASRERKLRCCSLSAEALCNLRSWLDN | 389 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 7163667 | 7166100 | + | Conep20aG0105900.1 | Cone20ag1024 | 460928 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag1024 | 389 | SMART | PP2C_4 | 75 | 353 | IPR001932 | - | |
Cone20ag1024 | 389 | ProSitePatterns | PPM-type phosphatase domain signature. | 124 | 132 | IPR000222 | GO:0043169(InterPro) | |
Cone20ag1024 | 389 | Pfam | Protein phosphatase 2C | 95 | 347 | IPR001932 | - | |
Cone20ag1024 | 389 | Gene3D | - | 79 | 363 | IPR036457 | - | |
Cone20ag1024 | 389 | ProSiteProfiles | PPM-type phosphatase domain profile. | 85 | 355 | IPR001932 | - | |
Cone20ag1024 | 389 | SMART | PP2C_SIG_2 | 100 | 355 | IPR001932 | - | |
Cone20ag1024 | 389 | SUPERFAMILY | PP2C-like | 79 | 357 | IPR036457 | - | |
Cone20ag1024 | 389 | FunFam | Probable protein phosphatase 2C 22 | 71 | 358 | - | - | |
Cone20ag1024 | 389 | CDD | PP2Cc | 84 | 355 | IPR001932 | - | |
Cone20ag1024 | 389 | PANTHER | PROTEIN PHOSPHATASE 2C | 59 | 355 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag1024 | Cone-Chr20:7163667 | Cone8ag0907 | Cone-Chr8:8797371 | 1.03E-97 | dispersed | |
Cone14ag0667 | Cone-Chr14:3439058 | Cone20ag1024 | Cone-Chr20:7163667 | 3.72E-17 | wgd | |
Cone15ag0704 | Cone-Chr15:3824156 | Cone20ag1024 | Cone-Chr20:7163667 | 4.19E-132 | wgd | |
Cone17ag0390 | Cone-Chr17:1857864 | Cone20ag1024 | Cone-Chr20:7163667 | 8.50E-264 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag1024 | K14803 | - | mtr:11417065 | 541.191 |