Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone20ag1046 | ATGATTTTCATTATCATCACCTTCCTCCTCTCCATTACAACCTTCACTTTCTTCACTATACAATATTGTCTAATGCAACAGACCCGACATGGGTTGTTGCCGGTACGGCATGTAATCCGGTTGTTGTCATCACTCCTAACTCTTAACATCTATGAATGGGTCACTGAACTTCTATGTACCCACAATGGTACGTTCATACTTAGATTTCCTTACTTTCGTAACCTCAATCGTGTTATTCTAACCTCGAACCCAAATAACATCGAACACTTCCTTAAAAAGAAGTTTTCAAATTACCCGAAAGGACCATTTTTTCGTGACGTAGTTGATGATTTTCTGGGAGATGGGATTTTCAGTGCGGACGGTGAGATTTGGCAACAACAGAGGAAGATTGCAGGTGTTGTGTTTCATTCCTCCAAGTTCAAGAAAATGACCACGGAATCATTGTTTCAGCTTGTTCACACTCGATTACTACCTGTTTTAGATGATTCTGTTGAGAAATTGGTCCATATTGATCTTCATGAGATTCTTGTAAGATTAACTTTTGATAGTGTTTGCATGATTTCGTTTGGAGTCAACCCGGGTTGTTTGAAACCCGATTTTCCTGAAGTACCTTTCCGGGCTGCTATCGAAAATGCGGCTCAAGATATTTTCCCTAGATTTGTGTTGTTCGAATGGGTTTGGAAGACAATGAGGTGGTTGAACTTGGGGATTGAGAAAAGGATCAAGTCATCAATACAAGAGATCGATAAGTTCACGAAAAAAGTGATTTGGCATAGGAAGAAAGAACTAGATTCAGAAAGTTCATCTATAGGAGATAAAAAAGAAGAGAAGGGAATTAGATCGGACTTATTAACGACCTTTATCAAGCATAGGGACAAGGATGGACAAGCATTTTCCGATAAATTTTTGCGAGACATATGCGTGAATTTCGTAATTGCGGGTAGAGATACATCTTCGGTGGCATTGAGTTGGTTTTTCTGGTTGATTGAGAAGAATCCAGAGGTGGAAGAGAGAATTATAGAGGAGATATATAGAGTTGTGGGTGAGAAAGATGAGGTAAAAGTGAAGGAATTGGTCGAAAATGGGGATGTCGTGTTTGGAGGCGAGGAACTTGAGAAGATGGAGTATTTGCAGGCCGCTTTGTCCGAAACTCTAAGGTTGTATCCTCCTTTGCCAGTGGACAACAAGGAGGCTATTGAAGATGACATATTTCCAGACGGTACCATCGTGAAGAAAGGATCAAAGGTTGTGTACGTAATATATGCAATGGGAAGAATGGAAGCGATATGGGGAAAGGATTTCGAGAAATTCAGGCCAGAAAGATGGTTAAGAAATGGTAAGTTTACGAGTGAGTCTGCCTACAAATTCACCGCCTTTAATGGCGGTCCTCGACTTTGCTTAGGAAAGGATTTTGCATACTACCAAATGAAATATGTGGCCGCATCTATCTTGTATCGCTACCGAGTGAGGGTGGTGGAAGGTCACGTGGTGGTGCCAAAACTTTCATTGACTTTGTATATGAAACATGGTTTGAAGGTGAAGTTGTTTAGGCGTGATGAGGCCAAGCTTCGTAACAAGTACATCAATTTCGAACTTGTTTAA | 1602 | 40.64 | MIFIIITFLLSITTFTFFTIQYCLMQQTRHGLLPVRHVIRLLSSLLTLNIYEWVTELLCTHNGTFILRFPYFRNLNRVILTSNPNNIEHFLKKKFSNYPKGPFFRDVVDDFLGDGIFSADGEIWQQQRKIAGVVFHSSKFKKMTTESLFQLVHTRLLPVLDDSVEKLVHIDLHEILVRLTFDSVCMISFGVNPGCLKPDFPEVPFRAAIENAAQDIFPRFVLFEWVWKTMRWLNLGIEKRIKSSIQEIDKFTKKVIWHRKKELDSESSSIGDKKEEKGIRSDLLTTFIKHRDKDGQAFSDKFLRDICVNFVIAGRDTSSVALSWFFWLIEKNPEVEERIIEEIYRVVGEKDEVKVKELVENGDVVFGGEELEKMEYLQAALSETLRLYPPLPVDNKEAIEDDIFPDGTIVKKGSKVVYVIYAMGRMEAIWGKDFEKFRPERWLRNGKFTSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASILYRYRVRVVEGHVVVPKLSLTLYMKHGLKVKLFRRDEAKLRNKYINFELV | 533 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 20 | 7299271 | 7301179 | - | Conep20aG0108400.1 | Cone20ag1046 | 460950 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone20ag1046 | 533 | SUPERFAMILY | Cytochrome P450 | 38 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | Gene3D | Cytochrome P450 | 34 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | PRINTS | E-class P450 group I signature | 378 | 396 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | PANTHER | CYTOCHROME P450 | 41 | 511 | - | - | |
| Cone20ag1046 | 533 | Pfam | Cytochrome P450 | 77 | 503 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1046 | 533 | FunFam | Cytochrome P450 | 25 | 521 | - | - | |
| Cone20ag1046 | 533 | CDD | CYP86A | 64 | 511 | - | - | |
| Cone20ag1046 | 533 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone18ag1124 | Cone-Chr18:8146734 | Cone20ag1046 | Cone-Chr20:7299271 | 4.09E-36 | dispersed | |
| Cone20ag1046 | Cone-Chr20:7299271 | Cone2ag0628 | Cone-Chr2:4018481 | 5.61E-150 | dispersed | |
| Cone11ag1211 | Cone-Chr11:9121646 | Cone20ag1046 | Cone-Chr20:7299271 | 1.48E-207 | wgd | |
| Cone18ag0381 | Cone-Chr18:1846351 | Cone20ag1046 | Cone-Chr20:7299271 | 3.08E-201 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone20ag1046 | K15402 | - | mtr:11444405 | 605.905 |