Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1046 ATGATTTTCATTATCATCACCTTCCTCCTCTCCATTACAACCTTCACTTTCTTCACTATACAATATTGTCTAATGCAACAGACCCGACATGGGTTGTTGCCGGTACGGCATGTAATCCGGTTGTTGTCATCACTCCTAACTCTTAACATCTATGAATGGGTCACTGAACTTCTATGTACCCACAATGGTACGTTCATACTTAGATTTCCTTACTTTCGTAACCTCAATCGTGTTATTCTAACCTCGAACCCAAATAACATCGAACACTTCCTTAAAAAGAAGTTTTCAAATTACCCGAAAGGACCATTTTTTCGTGACGTAGTTGATGATTTTCTGGGAGATGGGATTTTCAGTGCGGACGGTGAGATTTGGCAACAACAGAGGAAGATTGCAGGTGTTGTGTTTCATTCCTCCAAGTTCAAGAAAATGACCACGGAATCATTGTTTCAGCTTGTTCACACTCGATTACTACCTGTTTTAGATGATTCTGTTGAGAAATTGGTCCATATTGATCTTCATGAGATTCTTGTAAGATTAACTTTTGATAGTGTTTGCATGATTTCGTTTGGAGTCAACCCGGGTTGTTTGAAACCCGATTTTCCTGAAGTACCTTTCCGGGCTGCTATCGAAAATGCGGCTCAAGATATTTTCCCTAGATTTGTGTTGTTCGAATGGGTTTGGAAGACAATGAGGTGGTTGAACTTGGGGATTGAGAAAAGGATCAAGTCATCAATACAAGAGATCGATAAGTTCACGAAAAAAGTGATTTGGCATAGGAAGAAAGAACTAGATTCAGAAAGTTCATCTATAGGAGATAAAAAAGAAGAGAAGGGAATTAGATCGGACTTATTAACGACCTTTATCAAGCATAGGGACAAGGATGGACAAGCATTTTCCGATAAATTTTTGCGAGACATATGCGTGAATTTCGTAATTGCGGGTAGAGATACATCTTCGGTGGCATTGAGTTGGTTTTTCTGGTTGATTGAGAAGAATCCAGAGGTGGAAGAGAGAATTATAGAGGAGATATATAGAGTTGTGGGTGAGAAAGATGAGGTAAAAGTGAAGGAATTGGTCGAAAATGGGGATGTCGTGTTTGGAGGCGAGGAACTTGAGAAGATGGAGTATTTGCAGGCCGCTTTGTCCGAAACTCTAAGGTTGTATCCTCCTTTGCCAGTGGACAACAAGGAGGCTATTGAAGATGACATATTTCCAGACGGTACCATCGTGAAGAAAGGATCAAAGGTTGTGTACGTAATATATGCAATGGGAAGAATGGAAGCGATATGGGGAAAGGATTTCGAGAAATTCAGGCCAGAAAGATGGTTAAGAAATGGTAAGTTTACGAGTGAGTCTGCCTACAAATTCACCGCCTTTAATGGCGGTCCTCGACTTTGCTTAGGAAAGGATTTTGCATACTACCAAATGAAATATGTGGCCGCATCTATCTTGTATCGCTACCGAGTGAGGGTGGTGGAAGGTCACGTGGTGGTGCCAAAACTTTCATTGACTTTGTATATGAAACATGGTTTGAAGGTGAAGTTGTTTAGGCGTGATGAGGCCAAGCTTCGTAACAAGTACATCAATTTCGAACTTGTTTAA 1602 40.64 MIFIIITFLLSITTFTFFTIQYCLMQQTRHGLLPVRHVIRLLSSLLTLNIYEWVTELLCTHNGTFILRFPYFRNLNRVILTSNPNNIEHFLKKKFSNYPKGPFFRDVVDDFLGDGIFSADGEIWQQQRKIAGVVFHSSKFKKMTTESLFQLVHTRLLPVLDDSVEKLVHIDLHEILVRLTFDSVCMISFGVNPGCLKPDFPEVPFRAAIENAAQDIFPRFVLFEWVWKTMRWLNLGIEKRIKSSIQEIDKFTKKVIWHRKKELDSESSSIGDKKEEKGIRSDLLTTFIKHRDKDGQAFSDKFLRDICVNFVIAGRDTSSVALSWFFWLIEKNPEVEERIIEEIYRVVGEKDEVKVKELVENGDVVFGGEELEKMEYLQAALSETLRLYPPLPVDNKEAIEDDIFPDGTIVKKGSKVVYVIYAMGRMEAIWGKDFEKFRPERWLRNGKFTSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASILYRYRVRVVEGHVVVPKLSLTLYMKHGLKVKLFRRDEAKLRNKYINFELV 533
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
20 7299271 7301179 - Conep20aG0108400.1 Cone20ag1046 460950
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1046 533 SUPERFAMILY Cytochrome P450 38 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 Gene3D Cytochrome P450 34 530 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 PANTHER CYTOCHROME P450 41 511 - -
Cone20ag1046 533 Pfam Cytochrome P450 77 503 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag1046 533 FunFam Cytochrome P450 25 521 - -
Cone20ag1046 533 CDD CYP86A 64 511 - -
Cone20ag1046 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag1124 Cone-Chr18:8146734 Cone20ag1046 Cone-Chr20:7299271 4.09E-36 dispersed
Cone20ag1046 Cone-Chr20:7299271 Cone2ag0628 Cone-Chr2:4018481 5.61E-150 dispersed
Cone11ag1211 Cone-Chr11:9121646 Cone20ag1046 Cone-Chr20:7299271 1.48E-207 wgd
Cone18ag0381 Cone-Chr18:1846351 Cone20ag1046 Cone-Chr20:7299271 3.08E-201 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1046 K15402 - mtr:11444405 605.905