Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1052 ATGCCCGGAAATATAATGGAGATTGAGCTTCATAACTTCATGACCTTCAATCACTTGAAATGCAAACCAGCATCTCGACTAAACCTTGTAATTGGGCCAAATGGTTCAGGTAAAAGCTCTCTTGTGTGTGCCATTGCACTTGGTCTTGGGGGGGAGCCTCAGCTGCTTGGGAGGGCAACGAGTATTGGAGCATATGTCAAGCGTGGGGAGGAGTCGGGTTATATTAAAATTACATTAAGAGGAGACACAGAAGAGGAGCAGATTACCATCATGCGCAGAATGGACACTCATAATAAGTCTGAGTGGTTGTTCAATGGTAAAGTCGTGCCAAAAAAAGATTTAACTGAAATCATTCAAAGGTTCAACATTCAAGTTAATAATTTGACTCAATTCTTACCACAGGACAGGGTCTGTGAGTTTGCCAAATTAAGTCCTGTGCAACTCTTAGAAGAGACTGAAAAGGCTGTTGGTGATCCACAACTTCCAATCCAACACCGTGCTCTAATAGAGAAGACTCGCGAATTAAAGAATATAGAGCGTGCTGTTGAAAAAAATGGCGACACCTTAAATCAGTTGAAGGCACTAAATTCCGAGCAAGAGAGAGATGTTGAGCGTGTTCATCAAAGAGAAGAGCTCTTAGCAAAGGTTGAGGCCATGAAGAAGAAATTACCATGGCTGAAGTATGATATGAAGAAGGCTGAATATATGGAAGCCAAGAACCGTGAGACAGATGCCAAGCGGAAGTTGGATGAAGCTGCAAGAGCATTAAATAATCTAAAAGAACCAATTGAGAAGGAGAAAAGGGAGAAAGCATCACTGGATACTAAGATCAAGAAAATTAGCAATCTCATGAATGATCATTCCAAGAAGCGCATGGAATGCCTGGGGAATGAAAACCATTTGGGTGTACAAGTACAAGGAAAGTACAAAGAAATGGAAGACCTGAGGAGACAAGAAGAATCTCGTCAACAAAGACTTTTACAAGCAAAAGAGGAACTTGCTGCTGCTGAGCTAGAACTTGAAAATTTGCCAACCTATGAGCCTCCTAAAGATGATATTGAAAGATTAGGCAGTCAAATTTTGGAGCTAGAAGTTTCTGCAAATCAAAAAAGGCTTTTGAAGACTGAGAATGAAAAGTTTTTATCTCAAAAAAGGTCAACCTTGAGGCAATGTGCAGATAGATTAAAGGATATGGAGAGTACAAATATGAAACTTTTGCAGGCATTGAGAAATTCAGGTGTTGAAAAGATTTTTGATGCTTATCGGTGGGTGCAAGAACATCGTCATGAATTCAACAAGGAGGTCTATGGTCCAGTTTTGCTAGAGGTTAATGTTTCAAACCGATTTCATGCGGACTACTTAGAAGGTCATCTAGCTTTTTACATCTGGAAGTCTTTCATAACTCAAAATTCTCATGATCGTGATTTGCTGGTAAAAAACCTAAGTTCATTCGATGTTCCAATTTTGAATTATGTGGGTGGTGAAGGCCAGTCAAGAGAGCCCTTTGACATTTCCGAGAGGGTGCGTGCACTTGGCATCACTTCTAGGCTTGACCAAGTTTTTGATGCTCCCAATGCCGTCAAGGAGGTTTTGACTGGCCAATTTGGTTTGGATAGATCATATATTGGTTCAAAGGAAACTGATCAAAAGGCAGACGAGGTCTCCAAATTGGGAATTTTAGACTTTTGGACTCCAGAAAATCACTATAGGTGGACGCGGTCTAGATATGGCAATCATATATCTGGAAGTGTGGAGCCAGTGGGTCGCTCACGACTTCTTATGGGCAGCTTGGATGCAAGTGAAATTGATGGGCTGAGGTCCCGGAAGAATGAGCTCGAACAATCTGTTTCCACTTTAGAAGAAAGCTATAGGTCTCTTCAAAATGAAATAAGACACATAGAGGACGAAGCAGCTAAGCTTCGTAAAGAGCGGGAGGAAATCATCAACACTGTACAGCATGAGAAGAGAAAACGTCGTGAAATGGAAAATCGTATCAATCAAAGGAGAAAAAAATTAGGTTCTATGGAGCCGGAGGATGACCTGGATACTGTTATACAGAAGCTTACCGATGAATCAGCAAAATTGAATATTCAGCGCTACCATTATGTGATTGAAATTAAGAATCTACTTGTTGAAGCTCTATCTTCCAGACGATCGATTGCTGCAAAGCATATGGCCTCTATTCAATTGGAAGCAAAGATTAGAGATTTGGAGGCCAATCTAAAGCAGCATGAAAAGTTTGCCCTGCAAGCATCGCTGCATTTTGAGAATTGTAAGCAGGAAGTAGAAGATTGTCGACAGCGACTATCAGCTGCCAAGAGGCATGCAGAATCTATTGCTGTGATCACTGCAGAACTTGAAAAGGAGTTCCTTGAGATGCCTACAACAATTGAGGAATTGGAGGCTGCTATTCAAGATAATATCTCTGAAGCTAATTCAATTCTTTTCTTGAACCACAATATACTGGAGGAATATGAACACCGCCGGCGTCAGATAGAGTCCATTGCTTTAAAACTAGAAGCTGATAAGGAGGAGCTAAGGAGAAATAGAGCTGAAGTGGATAAACTCAAGAAGAATTGGCTTCCCACATTGAGAAACCTTGTTGCTCAGATAAATGATACTTTTGGCCGTAACTTCCAAGAAATGGCTGTTGCTGGAGAAGTTTCATTGGATGAGCATGACATGGATTTCGATCAATTTGGAATACTTATAAAAGTAAAGTTCAGACAAACGGGACAGCTTCAGGTTCTCAGTGCTCATCATCAATCTGGAGGGGAACGTTCGGTTTCAACAATCCTATATCTTGTTTCTCTACAAGATCTGACCAACTGTCCCTTTCGGGTCGTTGATGAGATTAATCAGGGCATGGATCCTATAAATGAACGAAAAATGTTCCAACAACTGGTGAGAGCTGCAAGTCAACCAAACACACCACAGTGTTTTTTACTAACCCCGAAGTTGCTACCAGATCTGGAATACAGTGAGGCCTGCAGTATACTAAACATCATGAACGGACCTTGGATCGAGCAGCCATCGAAAGTATGGAGCGGTGGAGATTGTTGGGGAACAGTCATGGATTTAGTAGGTAAAGGTAGAAGCTGA 3102 41.3 MPGNIMEIELHNFMTFNHLKCKPASRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRATSIGAYVKRGEESGYIKITLRGDTEEEQITIMRRMDTHNKSEWLFNGKVVPKKDLTEIIQRFNIQVNNLTQFLPQDRVCEFAKLSPVQLLEETEKAVGDPQLPIQHRALIEKTRELKNIERAVEKNGDTLNQLKALNSEQERDVERVHQREELLAKVEAMKKKLPWLKYDMKKAEYMEAKNRETDAKRKLDEAARALNNLKEPIEKEKREKASLDTKIKKISNLMNDHSKKRMECLGNENHLGVQVQGKYKEMEDLRRQEESRQQRLLQAKEELAAAELELENLPTYEPPKDDIERLGSQILELEVSANQKRLLKTENEKFLSQKRSTLRQCADRLKDMESTNMKLLQALRNSGVEKIFDAYRWVQEHRHEFNKEVYGPVLLEVNVSNRFHADYLEGHLAFYIWKSFITQNSHDRDLLVKNLSSFDVPILNYVGGEGQSREPFDISERVRALGITSRLDQVFDAPNAVKEVLTGQFGLDRSYIGSKETDQKADEVSKLGILDFWTPENHYRWTRSRYGNHISGSVEPVGRSRLLMGSLDASEIDGLRSRKNELEQSVSTLEESYRSLQNEIRHIEDEAAKLRKEREEIINTVQHEKRKRREMENRINQRRKKLGSMEPEDDLDTVIQKLTDESAKLNIQRYHYVIEIKNLLVEALSSRRSIAAKHMASIQLEAKIRDLEANLKQHEKFALQASLHFENCKQEVEDCRQRLSAAKRHAESIAVITAELEKEFLEMPTTIEELEAAIQDNISEANSILFLNHNILEEYEHRRRQIESIALKLEADKEELRRNRAEVDKLKKNWLPTLRNLVAQINDTFGRNFQEMAVAGEVSLDEHDMDFDQFGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWSGGDCWGTVMDLVGKGRS 1033
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 7357085 7364892 - Conep20aG0109000.1 Cone20ag1052 460956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1052 1033 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 1026 IPR027131 GO:0000724(PANTHER)|GO:0000724(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006281(InterPro)|GO:0016887(InterPro)|GO:0030915(InterPro)|GO:0030915(PANTHER)
Cone20ag1052 1033 FunFam Structural maintenance of chromosomes 5 829 1000 - -
Cone20ag1052 1033 Coils Coil 755 775 - -
Cone20ag1052 1033 Coils Coil 309 339 - -
Cone20ag1052 1033 Coils Coil 727 747 - -
Cone20ag1052 1033 Coils Coil 235 283 - -
Cone20ag1052 1033 Coils Coil 822 859 - -
Cone20ag1052 1033 Coils Coil 175 209 - -
Cone20ag1052 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 976 IPR027417 -
Cone20ag1052 1033 Coils Coil 602 671 - -
Cone20ag1052 1033 Gene3D - 4 192 IPR027417 -
Cone20ag1052 1033 Gene3D - 827 991 IPR027417 -
Cone20ag1052 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 735 984 IPR027417 -
Cone20ag1052 1033 Pfam RecF/RecN/SMC N terminal domain 5 971 IPR003395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1073 Cone-Chr1:55324773 Cone20ag1052 Cone-Chr20:7357085 1.70E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1052 K22803 - csv:101210248 1637.47