Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1063 ATGGAAGAAGATTATACGATGATCCATTATGGGATCAGGAATGGATACGAAAGATTTCTTGCGGAGCAAGGTAAATGCTCGGTAAGGTTAACCGAGATCTTTGCGAAAGCAGCGAAGCGGATTACGGGTTTCTTTCTAATGGTTATTTTGTGCAACCTCTTACATTGGTTTTTACGGCCATTATCCCAGCCTAAAATCATTTCTGATACAATTATAGGTTTGCTTCTTGGCAATTTAGCATTCGTACAAAAGTTCCTTGAAATAAAATCGGCTAAGGCGTTACGCTACGTAGTCGATTTCGGGATGACAATATACATGTTTGTCCTCGGTTTAGAAAACGATCCCTATGTACTTTTCCGAGCACCAACCCAAGATGCTAAAGTAGCATATGCCGGAATGGTTTCGACATTTATCATAGCAGGGTCCACAACCCCTTTTCTCGGTTACACAAAGGAAAGAGAAGTTGGTTTTGCTCTGTTATTCTCAACCGCTATTTCCGGGACAGCTTCTCCGGTCCTAACGCGTATGATAACAAATCTCAAGATCGGAAAATCAGATATCGGGCGGCTCGTGATTGCTGCAGGAATGCATTCCGATTTTATCACCACTCTCCTTTTATCACTCACATACCCTTTTTACCAGTTCCATGAGCCTGAGATTAGTATCGGAAAAGTGGTTTTATTAGCTGTTATGCTTGTACTCCAAGTAGTTATAGCGGCTAAGGTTTCGCCATTTTTGATGAATTGGGTTAATAATGAGAATCCAGAAGGTAAACAAATGAAAGCTTCACATCTTGTTCTTTCCATTGCCTTCATGGCTTTGCTCGTTTGTTTTCCGGTTTTAGCCGGATATAGTTCCATCTTGAGTGCGTTTTTGGCTGGGACTTTTTTGCCTCGAGAAGGGAGAATATCAAGATGGGTTGTTGGAAAAGTTAACTATTTCTTAACTACCATTTTCTATCCCATTTTTTTCCTTTGGATGGGGGTTGAATCTCGGTTTGCGGAATTTCAGCCCGGCCAAGTCATGACATGGGTAAGGTTGGTTTCACTTTTTATTATCATCACGATTGGGAAGGTTACCGGAACGGTTATCTCCGGGGTTTTTTTGGGGTTTCATTGGCCGGAATGTCTAGCACTTGGATTGCTTTTAACCACCAAGGGACATTTTCACATGTACTTGGCTATTGCTGCAAAAACAGCTGGAAAGACTACTACTTCATCGACCACCGTAATGATGTTAGTGATATTTTTCACCGTCGTGCATGGTCCTGCAGTCATAGCACATATCATTGAAAGAGCAAGAAAACGCTTTCCCACACAACGGATGGCTCTTCAATTGCTCGATCCATCTAGCGAGTTAAGAATCTTGCTATGCCTTCACGGACCTCAAAACATACCGACAACGATAAACTTCATGGAGATTGCTCGGGCCAAACCGGTCCCAGGAATTGTAGTTTACGTCACGGACATGATAGAACTCACTAATGAAATCGCATCCACATTAGTCCAGGGAGAAGGAGATCAGGCGACTGTGACGGTTACGGACAGGAGAGTGACTGAAATGAGAGACCAGGTCACCACTTCGATTAAAGCCTATGTAGACCAAAGTGGGGAAGGGGTAACCTTCAAACGGATGTTAGCACTCTCAACGTTCAATGACATGCCGCAAGACATTTGCATCTTAGCTGAGGAAATGACGGTAGCCCTTATCATACTACCGTTTCACAAGATCCAGCTTGTAGACGGGAGATTAGATGAAGGCCATTCCGGTTTTCGTTATGTAAACCGCAAGGTGTTAAGAAATGCCCCATGTTCGGTTGGGATCTTGGTTGACCGGGGGCTAGGGATCGAAAAAATATCGAGATTGAGCCCCTCTCTCAATGTAGGAGTGATATTCATAGGTGGGAAGGATGATAGAGAAGCATTAGCCTATGCGGGCCGTGTGGCAAGACATCCTGGGACTAAACTCACGGTAATAAGATTTCTAGTCGATACAAACATGGACAATTCTACGATGAGGATGCATCGGTTCAACAACCCCGAGCATGAAGAAGAAATGAAGCAAGACGACGAATGTTTTGCATTTTTCTATGAACGGCATGTGGCAGGGGGGCCGGTTGCTTATACAGAGAAGCATCTTGCAGATTCTTCCGAGGCGTATTCTACTTTGAGATCGTTAGAAGGGGAATATTCGCTTTTGATTGTTGGAAGAGGAGGGAGGGTGAATTCATTATTAACAGTCGGGATGAATGATTTGCAGCAGTGCCCGGAATTGGGTCCGATAGGTGACATTCTTTCCGGGTCAGAATTTTTGATCAAGACGTCGATTTTGATCATACAGCAACCGAATCTTAAGGGAGAAATAGATGGTCTTAATGATGACTTTGCAATCATGTAA 2397 43.47 MEEDYTMIHYGIRNGYERFLAEQGKCSVRLTEIFAKAAKRITGFFLMVILCNLLHWFLRPLSQPKIISDTIIGLLLGNLAFVQKFLEIKSAKALRYVVDFGMTIYMFVLGLENDPYVLFRAPTQDAKVAYAGMVSTFIIAGSTTPFLGYTKEREVGFALLFSTAISGTASPVLTRMITNLKIGKSDIGRLVIAAGMHSDFITTLLLSLTYPFYQFHEPEISIGKVVLLAVMLVLQVVIAAKVSPFLMNWVNNENPEGKQMKASHLVLSIAFMALLVCFPVLAGYSSILSAFLAGTFLPREGRISRWVVGKVNYFLTTIFYPIFFLWMGVESRFAEFQPGQVMTWVRLVSLFIIITIGKVTGTVISGVFLGFHWPECLALGLLLTTKGHFHMYLAIAAKTAGKTTTSSTTVMMLVIFFTVVHGPAVIAHIIERARKRFPTQRMALQLLDPSSELRILLCLHGPQNIPTTINFMEIARAKPVPGIVVYVTDMIELTNEIASTLVQGEGDQATVTVTDRRVTEMRDQVTTSIKAYVDQSGEGVTFKRMLALSTFNDMPQDICILAEEMTVALIILPFHKIQLVDGRLDEGHSGFRYVNRKVLRNAPCSVGILVDRGLGIEKISRLSPSLNVGVIFIGGKDDREALAYAGRVARHPGTKLTVIRFLVDTNMDNSTMRMHRFNNPEHEEEMKQDDECFAFFYERHVAGGPVAYTEKHLADSSEAYSTLRSLEGEYSLLIVGRGGRVNSLLTVGMNDLQQCPELGPIGDILSGSEFLIKTSILIIQQPNLKGEIDGLNDDFAIM 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 7422683 7425391 + Conep20aG0110200.1 Cone20ag1063 460967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1063 798 Gene3D - 37 438 IPR038770 -
Cone20ag1063 798 Gene3D - 470 751 - -
Cone20ag1063 798 PANTHER CATION/H + ANTIPORTER 43 782 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cone20ag1063 798 Pfam Sodium/hydrogen exchanger family 51 426 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag1063 Cone-Chr20:7422683 Cone6ag1271 Cone-Chr6:10152369 1.28E-104 dispersed
Cone17ag0352 Cone-Chr17:1648723 Cone20ag1063 Cone-Chr20:7422683 1.72E-36 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1063 K26731 - csv:101211645 1073.15