Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1131 ATGGCTACAAAAACTGAAGGAAAGGCAGTCGGTATCGATCTAGGCACCACGTACAGCTGTGTTGGTGTTTGGCAAAATGATCGAGTAGAGATCATAGCGAATGACCAAGGCAACAGAACCACTCCTTCTTACGTCGCGTTCACTGATACAGAGCGTTTGATTGGAGATGCAGCGAAGAATCAGGTCGCTATGAATCCTCACAACACCGTTTTTGATGCGAAGCGACTCATCGGCCGGAAGTTTTCTGATCCTTCTGTTCAGAGCGATATGAAACATTGGCCGTTCAAGGTGGTTCCTGGTCCAGGTGACAAGCCGATGATTGTGGTTCAGTACAAAGGTGAAGAGAAGCAGTTCGCAGCCGAAGAGATTTCATCTATGGTGCTTGTCAAGATGAAGGAAATCGCAGAGGCTTATCTAGGTCAAACTGTCAAAAACGCGGTCATCACTGTCCCTGCCTATTTCAACGATTCTCAGAGGCAGGCAACGAAGGATGCTGGAGCAATCTCAGGGCTTAACGTCCTGAGAATAATCAACGAGCCAACTGCTGCTGCCATTGCTTATGGTCTGGACAAGAAAGCGTCCAGATCTGGAGAGAAGAACGTACTTATTTTCGATCTTGGCGGTGGCACATTTGACGTCTCCCTGTTGACTATTGAGGAGGGAATCTTCGAGGTGAAAGCTACTGCTGGTGATACTCATCTAGGAGGTGAGGATTTTGATAACAGGCTTGTCAATCACTTTGTTCAAGAATTCAAGAGGAAACACAAGAAGGATATCAGTAGCAATGCAAGAGCTCTAAGGCGTTTGCGGACTGCTTGTGAAAGGGCGAAGAGGACTCTGTCTTCGACCACCCAAACCACGATCGAGATCGATTCCCTTTACGAAGGTATTGACTTTTACTCAACAATTACTCGAGCTAGGTTTGAAGAGTTGAATATGGATTTGTTCCGGAAGTGTATGGAGCCTGTGGAGAAATGTCTTCAGGATTCAAAGATTGATAAGGGTCAAGTTCATGAAATAGTTCTAGTCGGTGGTTCGACAAGGATTCCAAAAGTTCAGCAGCTGTTGCAAGATTTCTTTAATGGAAAAGAACTCTGCAAAAGCATAAACCCTGATGAAGCTGTTGCTTACGGGGCAGCTGTACAGGCTGCAATTTTAAGCGGAGAGGGGAATGAAAAGGTGCAAGATCTACTTCTGCTTGACGTCACACCTCTCAGTCTTGGCATTGAGACTGCTGGTGGCGTTATGACTGTCTTGATTCCGAGAAACACAACAATTCCAACTAAGAAAGAGCAAGTTTTTTCTACATATGCTGATAACCAGCCTGGTGTGTTGATTCAAGTGTATGAAGGTGAGAGGGCAAGGACTAAGGACAACAACCTTCTCGGAAAATTCGAGCTCTCTGGCATCCCACCTGCTCCAAGGGGTGTCCCTCAGATCAATGTCTGCTTCGACATTGATGCTAATGGTATCTTGAATGTATCTGCTGAGGATAAAACAGCTGGGGTTAAGAACAAAATTACAATAACAAATGATAAGGGGAGATTGAGCAAGGAAGAGATTGAGAGGTTGGTGCAGGAGGCTGAGAAGTACAAGGCAGAGGATGAGGGGGTGAAGAAGAAGGTGGAAGCTAAGAATTCTCTTGAGAATTATGCCTACAGTATGAGAAACACGATAAAGGATGAAAAATTTGCTGATAAATTAGATCCGGCAGACAAGCAGAAGATTGAGAAGGCAATTGATGTGACAGTTGAGTGGCTTGATAGAAACCAACTTGCAGAAGTGGAAGAGTTTGAAGACAAGTTGAAGGAACTGGAGGGATTGTGCAACCCCATAATTGCAAAGATGTATCAAGGTTCGGGTGGAGATGCGCCGATGGGTGGTGGAGCTGAGATGCCTAGTGGTGGATATGGCAAGGCTTCGGCTGGCGGCTCTTCTGCTGGGCCCAAGATTGAAGAAGTCGACTGA 1968 45.78 MATKTEGKAVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFSDPSVQSDMKHWPFKVVPGPGDKPMIVVQYKGEEKQFAAEEISSMVLVKMKEIAEAYLGQTVKNAVITVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISSNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLQDSKIDKGQVHEIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPTKKEQVFSTYADNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIERLVQEAEKYKAEDEGVKKKVEAKNSLENYAYSMRNTIKDEKFADKLDPADKQKIEKAIDVTVEWLDRNQLAEVEEFEDKLKELEGLCNPIIAKMYQGSGGDAPMGGGAEMPSGGYGKASAGGSSAGPKIEEVD 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 7724018 7726367 - Conep20aG0117200.1 Cone20ag1131 461035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1131 655 Coils Coil 588 608 - -
Cone20ag1131 655 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 623 IPR029048 -
Cone20ag1131 655 PRINTS 70kDa heat shock protein signature 396 415 - -
Cone20ag1131 655 PRINTS 70kDa heat shock protein signature 36 48 - -
Cone20ag1131 655 PRINTS 70kDa heat shock protein signature 58 66 - -
Cone20ag1131 655 PRINTS 70kDa heat shock protein signature 209 219 - -
Cone20ag1131 655 PRINTS 70kDa heat shock protein signature 369 389 - -
Cone20ag1131 655 PRINTS 70kDa heat shock protein signature 146 166 - -
Cone20ag1131 655 PRINTS 70kDa heat shock protein signature 8 21 - -
Cone20ag1131 655 PRINTS 70kDa heat shock protein signature 337 353 - -
Cone20ag1131 655 PRINTS 70kDa heat shock protein signature 477 493 - -
Cone20ag1131 655 Gene3D - 545 619 IPR029048 -
Cone20ag1131 655 MobiDBLite consensus disorder prediction 619 655 - -
Cone20ag1131 655 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cone20ag1131 655 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Cone20ag1131 655 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Cone20ag1131 655 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Cone20ag1131 655 FunFam Heat shock protein 70 10 197 - -
Cone20ag1131 655 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Cone20ag1131 655 Gene3D - 10 384 - -
Cone20ag1131 655 FunFam Heat shock protein 70 546 619 - -
Cone20ag1131 655 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Cone20ag1131 655 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Cone20ag1131 655 Gene3D Actin; Chain A, domain 4 235 318 - -
Cone20ag1131 655 FunFam Heat shock 70 kDa 391 545 - -
Cone20ag1131 655 FunFam Heat shock 70 kDa protein 198 260 - -
Cone20ag1131 655 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Cone20ag1131 655 Gene3D - 71 126 - -
Cone20ag1131 655 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Cone20ag1131 655 FunFam Heat shock 70 kDa 235 318 - -
Cone20ag1131 655 Coils Coil 514 541 - -
Cone20ag1131 655 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cone20ag1131 655 PANTHER HEAT SHOCK PROTEIN 70KDA 9 578 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Cone20ag1131 655 Gene3D - 192 366 - -
Cone20ag1131 655 FunFam Heat shock 70 kDa protein 71 126 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0303 Cone-Chr10:1439048 Cone20ag1131 Cone-Chr20:7724018 0 dispersed
Cone1ag0654 Cone-Chr1:6219559 Cone20ag1131 Cone-Chr20:7724018 0 dispersed
Cone1ag1289 Cone-Chr1:56259549 Cone20ag1131 Cone-Chr20:7724018 1.71E-28 dispersed
Cone1ag1291 Cone-Chr1:56260919 Cone20ag1131 Cone-Chr20:7724018 7.21E-37 dispersed
Cone20ag1131 Cone-Chr20:7724018 Cone5ag0274 Cone-Chr5:1161132 0 dispersed
Cone17ag0277 Cone-Chr17:1325603 Cone20ag1131 Cone-Chr20:7724018 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1131 K03283 - mdm:103405593 1176.0