Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag1134 | ATGGCGGACCTCAAAGAGCGCTTGCTTCCTCCAAGACCCATATCTGCTGTAAATCTAAGGGAAGCATCTCACAGACCATCAGCCTCTGGAAGGCAACCTTTTCAAGGCATAGATTTTCTAGGGCTAAAGAAGAGGGGACAAGGTCTTCGTTCTTGGATCCGGGTTGATTCATCTGGGAACTCTCAAATCATTGAGGTCGATAAGTTTACTATGATGCGTAGGTGTGACCTACCAGCTCGTGATTTACGCCTTCTTGATCCTTTATTTGTTTACCCCTCCACAATCCTTGGTAGAGAGAAGGCTATTGTTGTTAATTTGGAGCAGATTCGTTGTATTATCACAGCAGACGAAGTCTTTCTTTTGAATTCTCGTGATAATTATGTATTGCAATATGTGGTGGAGCTACAGCGACGATTAACCACTGCTGGAATTGGTGAGGTTTGGAAATCTGAAAATGCTGATTTGAACTGGAGGAGAGAAGGTAGAAATTTTGAGGATGTATTTGGTACCACGTCTCCAGATTATTTGCCCTTTGAATTTAGGGCTTTAGAAGTTGCATTGGAGGCTGCTTGTACATTTCTTGATTCCCAGGCAGCAGAATTAGAAATCGAGGCATACCCATTGCTGGATGAATTGACATCAAAGATCAGTACATTAAACTTGGAACGTGTCCGTCGTTTGAAAAGTAGACTTGTTGCATTGACTCGGAGAGTTCAGAAGGTTAGGGATGAAATAGAACAGCTTATGGATGATGATGGAGATATGGCAGAGATGTATCTCACTGAGAAGAAAAACAGGGCCGAGTCTCCATTTTATGGTGATCAGTCTGTAATGGGTTACAGATCAACTGATGGGGGATCTATTTCAGCACCTGTTTCTCCAGTCTCATCACCACCTGATGGCCGAAGGCTCGAGAAAACCCTAAGTATTGCAAGGAGTCGACATGAAAGTATGAGAAGTACAGAAAGTACTTCGGAAAGTATAGAAGAGCTTGAGATGTTATTGGAAGCTTACTTTGTGGTTATTGATAGCACCCTAAACAAATTGACCTCTGTACGTACAACACATATTAGAATAAAATGCCCACTTCATGTCATTCTATGTTACAATGTCTCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTTTCTTTTCGTGTACAGTTAA | 1173 | 42.03 | MADLKERLLPPRPISAVNLREASHRPSASGRQPFQGIDFLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVFLLNSRDNYVLQYVVELQRRLTTAGIGEVWKSENADLNWRREGRNFEDVFGTTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKNRAESPFYGDQSVMGYRSTDGGSISAPVSPVSSPPDGRRLEKTLSIARSRHESMRSTESTSESIEELEMLLEAYFVVIDSTLNKLTSVRTTHIRIKCPLHVILCYNVSPLSLSLSLSLSVFLFVYS | 390 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 7734583 | 7737514 | + | Conep20aG0117500.1 | Cone20ag1134 | 461038 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag1134 | 390 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 38 | 354 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
Cone20ag1134 | 390 | Pfam | Magnesium transporter MRS2-like | 56 | 267 | - | - | |
Cone20ag1134 | 390 | Coils | Coil | 224 | 251 | - | - | |
Cone20ag1134 | 390 | Gene3D | Magnesium transport protein CorA, transmembrane region | 127 | 361 | - | - | |
Cone20ag1134 | 390 | CDD | Mrs2_Mfm1p-like | 52 | 353 | IPR039204 | - | |
Cone20ag1134 | 390 | FunFam | Magnesium transporter MRS2-1 | 40 | 123 | - | - | |
Cone20ag1134 | 390 | Gene3D | - | 40 | 123 | - | - | |
Cone20ag1134 | 390 | MobiDBLite | consensus disorder prediction | 283 | 303 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag1134 | Cone-Chr20:7734583 | Cone9ag0537 | Cone-Chr9:2568874 | 3.25E-94 | dispersed | |
Cone11ag0946 | Cone-Chr11:7720456 | Cone20ag1134 | Cone-Chr20:7734583 | 1.22E-193 | wgd | |
Cone17ag0276 | Cone-Chr17:1309074 | Cone20ag1134 | Cone-Chr20:7734583 | 6.38E-232 | wgd | |
Cone20ag1134 | Cone-Chr20:7734583 | Cone4ag1110 | Cone-Chr4:9607687 | 2.37E-51 | wgd | |
Cone20ag1134 | Cone-Chr20:7734583 | Cone7ag1020 | Cone-Chr7:7874808 | 2.18E-73 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag1134 | K16075 | - | mdm:103443989 | 557.755 |