Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1134 ATGGCGGACCTCAAAGAGCGCTTGCTTCCTCCAAGACCCATATCTGCTGTAAATCTAAGGGAAGCATCTCACAGACCATCAGCCTCTGGAAGGCAACCTTTTCAAGGCATAGATTTTCTAGGGCTAAAGAAGAGGGGACAAGGTCTTCGTTCTTGGATCCGGGTTGATTCATCTGGGAACTCTCAAATCATTGAGGTCGATAAGTTTACTATGATGCGTAGGTGTGACCTACCAGCTCGTGATTTACGCCTTCTTGATCCTTTATTTGTTTACCCCTCCACAATCCTTGGTAGAGAGAAGGCTATTGTTGTTAATTTGGAGCAGATTCGTTGTATTATCACAGCAGACGAAGTCTTTCTTTTGAATTCTCGTGATAATTATGTATTGCAATATGTGGTGGAGCTACAGCGACGATTAACCACTGCTGGAATTGGTGAGGTTTGGAAATCTGAAAATGCTGATTTGAACTGGAGGAGAGAAGGTAGAAATTTTGAGGATGTATTTGGTACCACGTCTCCAGATTATTTGCCCTTTGAATTTAGGGCTTTAGAAGTTGCATTGGAGGCTGCTTGTACATTTCTTGATTCCCAGGCAGCAGAATTAGAAATCGAGGCATACCCATTGCTGGATGAATTGACATCAAAGATCAGTACATTAAACTTGGAACGTGTCCGTCGTTTGAAAAGTAGACTTGTTGCATTGACTCGGAGAGTTCAGAAGGTTAGGGATGAAATAGAACAGCTTATGGATGATGATGGAGATATGGCAGAGATGTATCTCACTGAGAAGAAAAACAGGGCCGAGTCTCCATTTTATGGTGATCAGTCTGTAATGGGTTACAGATCAACTGATGGGGGATCTATTTCAGCACCTGTTTCTCCAGTCTCATCACCACCTGATGGCCGAAGGCTCGAGAAAACCCTAAGTATTGCAAGGAGTCGACATGAAAGTATGAGAAGTACAGAAAGTACTTCGGAAAGTATAGAAGAGCTTGAGATGTTATTGGAAGCTTACTTTGTGGTTATTGATAGCACCCTAAACAAATTGACCTCTGTACGTACAACACATATTAGAATAAAATGCCCACTTCATGTCATTCTATGTTACAATGTCTCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTTTCTTTTCGTGTACAGTTAA 1173 42.03 MADLKERLLPPRPISAVNLREASHRPSASGRQPFQGIDFLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVFLLNSRDNYVLQYVVELQRRLTTAGIGEVWKSENADLNWRREGRNFEDVFGTTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKNRAESPFYGDQSVMGYRSTDGGSISAPVSPVSSPPDGRRLEKTLSIARSRHESMRSTESTSESIEELEMLLEAYFVVIDSTLNKLTSVRTTHIRIKCPLHVILCYNVSPLSLSLSLSLSVFLFVYS 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 7734583 7737514 + Conep20aG0117500.1 Cone20ag1134 461038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1134 390 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 38 354 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cone20ag1134 390 Pfam Magnesium transporter MRS2-like 56 267 - -
Cone20ag1134 390 Coils Coil 224 251 - -
Cone20ag1134 390 Gene3D Magnesium transport protein CorA, transmembrane region 127 361 - -
Cone20ag1134 390 CDD Mrs2_Mfm1p-like 52 353 IPR039204 -
Cone20ag1134 390 FunFam Magnesium transporter MRS2-1 40 123 - -
Cone20ag1134 390 Gene3D - 40 123 - -
Cone20ag1134 390 MobiDBLite consensus disorder prediction 283 303 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag1134 Cone-Chr20:7734583 Cone9ag0537 Cone-Chr9:2568874 3.25E-94 dispersed
Cone11ag0946 Cone-Chr11:7720456 Cone20ag1134 Cone-Chr20:7734583 1.22E-193 wgd
Cone17ag0276 Cone-Chr17:1309074 Cone20ag1134 Cone-Chr20:7734583 6.38E-232 wgd
Cone20ag1134 Cone-Chr20:7734583 Cone4ag1110 Cone-Chr4:9607687 2.37E-51 wgd
Cone20ag1134 Cone-Chr20:7734583 Cone7ag1020 Cone-Chr7:7874808 2.18E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1134 K16075 - mdm:103443989 557.755