Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1144 ATGCCGATTGATCACGATTCTTCAGTTTCCGGCCAGACTGTATGCGTTACTGGCGCCGGAGGCTTCATTGCTTCCTGGATCGTGAAATTGCTGCTCGAGAAAGGCTACACTGTTAGAGGAACTGTGAGAAATCCAGATGATCCGAAGAATAGTCATCTTAGAGTGCTCGAAGGAGCAGAGGAGAGGTTAACTCTATGTAAAGCTGATCTTCTTGATTACGAGAGTCTCAAAGTAGCCATTAATGGCTGCGATGGTGTTTTCCACACCGCGTCGCCTGTCACTGATGATCCAGAACAAATGGTGGAGCCGGCGGTGATTGGGACCAAAAACGTGATAATGGCTGCAGCAGAAGCAAAAGTGCGCCGCGTGGTGTTCACGTCATCAATCGGTGCGGTCTCTATGGACCCGAACCGGGGCCCCGATGAGGTGGTTGATGAGTCCTGTTGGAGTGATCTCGACTTTTGCAAGAACACCAAGAATTGGTATTGTTATGGGAAAGCCGTGGCGGAGCAAGCGGCATGGGAGGTGGCTAGGGAGCAAGGAGTAGACCTAGTCGTGGTGAACCCGGTTCTGGTTCTGGGACCCTTGTTGCAATCCACTATCAATGCTAGCATTGTTCATATCCTCAAGTACTTAACCGGCTCTGCCAAGACATATGCCAATTCTGTCCAGGCTTATGTACATGTTAGAGATGTGGCTCTAGCTCACATTCTCGTGTATCAGACTCCCTCTGCCTCTGGCCGATATCTTTGTGCCGAGAGCGTCCTTCACCGTGGCGACGTGGTCGAAATTCTTGCCAAGTTCTTTCCAGAGTATCCCATCCCCACCAAGTGCTCGGATGAAGTGAACCCAAGGAAAAAGCCATACAAATTTTCTAACCAGAAGCTCAAGGACTTGGGACTGGAGTTTACCACAGTGAAGCAGTGCTTATACGACACCGTTAAGTCCCTGCAGGAGAAGGGTCATCTCCCACCCCCAGTCCCTCCACAACAACAAGACTCGGTCCGGATTCAAACTTGA 1020 50.49 MPIDHDSSVSGQTVCVTGAGGFIASWIVKLLLEKGYTVRGTVRNPDDPKNSHLRVLEGAEERLTLCKADLLDYESLKVAINGCDGVFHTASPVTDDPEQMVEPAVIGTKNVIMAAAEAKVRRVVFTSSIGAVSMDPNRGPDEVVDESCWSDLDFCKNTKNWYCYGKAVAEQAAWEVAREQGVDLVVVNPVLVLGPLLQSTINASIVHILKYLTGSAKTYANSVQAYVHVRDVALAHILVYQTPSASGRYLCAESVLHRGDVVEILAKFFPEYPIPTKCSDEVNPRKKPYKFSNQKLKDLGLEFTTVKQCLYDTVKSLQEKGHLPPPVPPQQQDSVRIQT 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 7783391 7786907 - Conep20aG0118500.1 Cone20ag1144 461048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1144 339 CDD FR_SDR_e 14 301 - -
Cone20ag1144 339 MobiDBLite consensus disorder prediction 319 339 - -
Cone20ag1144 339 Gene3D - 4 339 - -
Cone20ag1144 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 318 IPR036291 -
Cone20ag1144 339 Pfam NAD dependent epimerase/dehydratase family 14 246 IPR001509 -
Cone20ag1144 339 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 316 IPR050425 GO:0016616(PANTHER)
Cone20ag1144 339 FunFam Cinnamoyl-CoA reductase 1 5 337 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0097 Cone-Chr18:494515 Cone20ag1144 Cone-Chr20:7783391 2.49E-94 dispersed
Cone20ag1144 Cone-Chr20:7783391 Cone2ag0746 Cone-Chr2:33247355 7.58E-94 dispersed
Cone17ag0269 Cone-Chr17:1269457 Cone20ag1144 Cone-Chr20:7783391 1.93E-237 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1144 K09753 - cit:102615114 593.964