Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1163 ATGCCCAACCTGGCACTGAAAGCAGGAAGCAGGCCACCATGGGTGGGTCTAGCCGCCGCAGTGTGGGTCCAGATAGCTGCGTCGAGCTCATACACTTTCCCACTCTACTCCCCGCTTCTCAAATCCGTACTGGGTCTGACCCAGCAGCAAGTCACCATCCTCGGAGTGGCTAATGATGTTGGAGAAAGCGTGGGTCTACTTCCTGGTATCGCTTGTAATAAGTTCCCTCCCTGGGCTGTTCTCCTTGTTGGCTGTGTTTGTAGCTTCTTCGGGTATGGTGTTATTTGGCTCGCTGCTAGTCAGACTGTCCCCAATTTGCCTTATTGGCTGCTATGGCTCACACTCTGTCTCGCTACAAACAGCAACGCATGGTTCGGGACCCCTGTCCTCGTAACCAACATGAGAAACTTCCCTCTCAGTCGAGGAACAGTTGCTGGAATTCTCAAAGGTTATATTGGCCTAAGTGCTGGAGTATACACCGTAATATACTCCATAATCCTCAAAGATTCCGATGTAGGCCTATTACTATTCCTCACGATAGGAATCCCCGTCTTATGCTTAGCCATGATGTTCTTTATCCGGCCCTGTACTCCAGCTTCTGGTGAAGATTCTTCAGAGCATGTCCATTTCCTCTTCGTCCAAGCCGCGAGTATCTTACTAGCTGTCTTTATTGTCTTAGCCACTGTCATAGAAGACACAATATCGATAAGTGATGCCGTTTCTTACACATTGGTTGGGATCATGATTGTACTTCTAATGGCCCCACTTGCAATCCCTGTCAAAATGACACTTTTTCCTGGGAAAAATAAGACATTGGGCACACATGTTGATTCCTCGGACCCTTTGGTTACGGATCTGTTGTTGACACCATCTTCATCGTCTGCTATGCTTGGGAGTTTTCAAGAGAATGAGTATACTTCCGATGTGGATACCTTACTTGCTGTGGGAGAGGGAGCGGTTAAGAAGAAAAGGAGGCCAAAAAGAGGGGAGGATTTTAAGGTGAAAGAAGCTGTTATCAAGGCAGATTTCTGGCTTCTTTGGTTCGTTTACTTTCTCGGGGTGGGTCCAGGAGTAACTGTCCTTAATAACTTGTCCCAAATCGGAGCTGCTTCTGGCGTCGATGACACCACAATACTACTTGCCCTCTTTAGCTTCTGCAATTTTGTCGGCCGGCTCGGTTCGGGAACTCTTTCCGAGCACTTTGTAAGGTCAAAGACAATACCCCGCGCTATGTGGATGACATGTGCTCAAATTATCATGGTTTTAGCATTCCTTCTATACGCGTCAAATTTTACGGGTTCTCTCTATGCTGCAACAGCTTTGCTCGGGATTTGCTACGGAGTTTTGTATGCAATGATGGTTCCAATTGTATCAGAGCTTTTCGGCCTGAAAAATTTCGGCGTTATTTACAGCTTCACCTTGCTAGGAAATCCAATCGGTGCACTTCTGTTTTCCGTTGTCCTTGCCGGTTCTATCTATGACACAGAAGCTGCTAAGCAAGGATCCACTACCTGCGTGGGCCCAGAATGTTTCCGGATCACTTACCTGGTTCTAGCTGGGATATGCGGGTTGGGTGCTGTATTGAGTGTGATTTTAACAGTTAGGATTAAGCCAGTCTATCAGATGCTCTATGCAGGAGGTTCTTTCCGACTGCCACAAAGTTCAGGTCACTAA 1674 47.25 MPNLALKAGSRPPWVGLAAAVWVQIAASSSYTFPLYSPLLKSVLGLTQQQVTILGVANDVGESVGLLPGIACNKFPPWAVLLVGCVCSFFGYGVIWLAASQTVPNLPYWLLWLTLCLATNSNAWFGTPVLVTNMRNFPLSRGTVAGILKGYIGLSAGVYTVIYSIILKDSDVGLLLFLTIGIPVLCLAMMFFIRPCTPASGEDSSEHVHFLFVQAASILLAVFIVLATVIEDTISISDAVSYTLVGIMIVLLMAPLAIPVKMTLFPGKNKTLGTHVDSSDPLVTDLLLTPSSSSAMLGSFQENEYTSDVDTLLAVGEGAVKKKRRPKRGEDFKVKEAVIKADFWLLWFVYFLGVGPGVTVLNNLSQIGAASGVDDTTILLALFSFCNFVGRLGSGTLSEHFVRSKTIPRAMWMTCAQIIMVLAFLLYASNFTGSLYAATALLGICYGVLYAMMVPIVSELFGLKNFGVIYSFTLLGNPIGALLFSVVLAGSIYDTEAAKQGSTTCVGPECFRITYLVLAGICGLGAVLSVILTVRIKPVYQMLYAGGSFRLPQSSGH 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 7857844 7860579 + Conep20aG0120400.1 Cone20ag1163 461067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1163 557 Pfam Major Facilitator Superfamily 357 536 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cone20ag1163 557 SUPERFAMILY MFS general substrate transporter 324 538 IPR036259 -
Cone20ag1163 557 Gene3D MFS general substrate transporter like domains 340 540 IPR036259 -
Cone20ag1163 557 Gene3D MFS general substrate transporter like domains 14 206 IPR036259 -
Cone20ag1163 557 Pfam Nodulin-like 13 260 IPR010658 -
Cone20ag1163 557 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 540 - GO:0016020(PANTHER)
Cone20ag1163 557 SUPERFAMILY MFS general substrate transporter 13 197 IPR036259 -
Cone20ag1163 557 CDD MFS_Mch1p_like 12 526 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag1163 Cone-Chr20:7857844 Cone2ag0042 Cone-Chr2:219837 1.75E-115 dispersed
Cone16ag0623 Cone-Chr16:7901708 Cone20ag1163 Cone-Chr20:7857844 4.80E-297 wgd
Cone2ag0382 Cone-Chr2:2013854 Cone20ag1163 Cone-Chr20:7857844 4.13E-298 wgd
Cone20ag1163 Cone-Chr20:7857844 Cone4ag0635 Cone-Chr4:2974147 9.99E-255 wgd
Cone20ag1163 Cone-Chr20:7857844 Cone7ag0598 Cone-Chr7:2876639 1.74E-255 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1163 - - - 0.0