Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1170 ATGGGGACAACGGTGCTTTCTGACTTAGCGACAGAGATTTTGATTCCGGTCTGCGCTGCGGTCGGGATCGCATTCTCACTGGTGCAGTGGTTTCTGGTCTCGCGCGTGAAGCTCACGCCCGAGCGGCACTCGCCGGCTGACGGCTCTAACAACAGGAAGAACGGTTACAATGACTATCTGATCGAAGAGGAGGAAGGTGTGAACGACCAAAACGTCGTCGCTAAATGTGCTGAGATACAGAATGCCATCTCTGAAGGTGCAACATCCTTTCTTTTCACTGAATATCAGTATGTTGGGATCTTTATGGTTGCATTTGCCATTTTGATATTTCTCTTCCTTGGATCGGTTGAGGGCTTCAGCGCAAAGAGTCAGCCATGTACTTACAATCCAGAAAATGTATGCAAGCCTGCTCTTGCCACAGCACTCTTCAGCACTGTATCTTTCGTGCTAGGTGCTATAACTTCAGTCCTGTCTGGTTACCTTGGGATGAAAATCGCAACCTATGCCAATGCGAGGACTACACTGGAAGCAAGAAAGGGTGTTGGTAAGGCCTTTATTACTGCATTCAGGTCTGGTGCTGTGATGGGGTTTCTTCTTGCTGCAAATGGTCTTTTGGTTCTTTACATTACGATCAATCTCTTTAAGCTGTATTATGGAGATGATTGGGAGGGACTTTTTGAGGCTATAACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTCTGTTCGGGAGAGTTGGTGGTGGAATTTACACCAAGGCAGCAGATGTGGGTGCTGACTTGGTAGGAAAGGTTGAAAGAAACATTCCAGAAGATGATCCGAGAAACCCAGCTGTTATTGCAGACAATGTTGGTGATAATGTTGGTGATATTGCCGGAATGGGATCTGATTTATTCGGCTCCTATGCTGAATCATCATGTGCTGCCCTTGTTGTGGCTTCCATATCCTCTTTTGGAATCGATCATAATCTCACTGCTATGTGCTACCCTCTGCTCATTAGTTCTATGGGTATCCTAGTCTGCTTGATCACAACCCTCTTTGCCACTGATTTCTTTGAGATCAAGGCTGTCAAGGAAATCGAACCAGCATTGAAAAACCAGCTCATCATTTCCACTGTTCTCATGACCATTGGAATTGCAATTATCAGCTGGATTGCTCTTCCGTCATCTTTCACAATCTTCAATTTCGGGACTCAAAAGGATGTCAAAAACTGGCAGCTGTTCTTGTGTGTGTGTGTTGGCTTATGGGCTGGACTTATCATTGGATTTGTAACAGAGTATTTTACTAGCAATGCTTACAGCCCAGTCCAAGATGTTGCTGACTCCTGCAGAACAGGAGCTGCTACAAACGTTATCTTCGGCCTTGCATTGGGATACAAATCTGTTATCATTCCAATTTTCGCCATTGCTATTAGTATTTTTGTTAGTTTCACCTTTGCTGCTATGTATGGAATTGCTGTTGCTGCCCTTGGAATGCTAAGCACTATTGCAACCGGGCTTGCCATAGACGCCTATGGGCCCATTAGTGACAATGCTGGAGGCATTGCTGAAATGGCTGGAATGAGTCACATAATTCGTGAAAGAACTGATGCTCTTGATGCTGCTGGAAACACCACTGCTGCTATTGGAAAGGGATTTGCAATTGGATCTGCTGCATTGGTCTCTTTGGCTTTATTCGGGGCCTTTGTTAGCCGTGCTGGTATCTCAACTGTTGACGTGTTGACTCCCAAGGTGTTTATCGGACTGCTCGTGGGGGCCATGCTTCCTTACTGGTTCTCTGCCATGACAATGAAGAGTGTAGGAAGTGCTGCTTTGAAGATGGTTGAAGAGGTTCGGAGGCAGTTCAACACTATTCCGGGTCTTCTAGAAGGTCTTGCCAAGCCAGATTATGCAACGTGTGTCAAGATCTCAACTGATGCTTCCATCAAGGAGATGATTCCACCCGGTGCCCTTGTCATGCTGACCCCACTCATTGTCGGAACCTTCTTTGGTGTTGAAACCTTGTCTGGTGTCCTAGCCGGTGCCCTTGTTTCTGGTGTCCAAATAGCAATATCTGCATCCAACACTGGTGGGGCATGGGACAATGCAAAGAAGTACATTGAGGCTGGTGCTTCGGAGCATGCAAGGACACTTGGTCCTAAGGGTTCGGAGCCACACAAGGCAGCTGTGATCGGAGACACCATTGGGGACCCACTTAAAGATACTTCGGGTCCTTCACTTAACATCCTCATCAAGCTCATGGCCGTGGAGTCTCTTGTCTTTGCTCCCTTTTTTGCTACTCATGGCGGCCTTCTTTTCAAGATCTTCTGA 2307 46.73 MGTTVLSDLATEILIPVCAAVGIAFSLVQWFLVSRVKLTPERHSPADGSNNRKNGYNDYLIEEEEGVNDQNVVAKCAEIQNAISEGATSFLFTEYQYVGIFMVAFAILIFLFLGSVEGFSAKSQPCTYNPENVCKPALATALFSTVSFVLGAITSVLSGYLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYITINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGIDHNLTAMCYPLLISSMGILVCLITTLFATDFFEIKAVKEIEPALKNQLIISTVLMTIGIAIISWIALPSSFTIFNFGTQKDVKNWQLFLCVCVGLWAGLIIGFVTEYFTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHIIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLLEGLAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTFFGVETLSGVLAGALVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 7893649 7897629 - Conep20aG0121100.1 Cone20ag1170 461074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1170 768 PIRSF H+-PPtase 11 766 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone20ag1170 768 Pfam Inorganic H+ pyrophosphatase 71 753 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone20ag1170 768 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 758 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone20ag1170 768 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 5 766 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone20ag1170 768 NCBIfam V-type H(+)-translocating pyrophosphatase 10 763 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0813 Cone-Chr10:4122367 Cone20ag1170 Cone-Chr20:7893649 0 dispersed
Cone20ag1170 Cone-Chr20:7893649 Cone3ag0838 Cone-Chr3:4287110 0 dispersed
Cone17ag0241 Cone-Chr17:1138676 Cone20ag1170 Cone-Chr20:7893649 0 wgd
Cone20ag1170 Cone-Chr20:7893649 Cone4ag0644 Cone-Chr4:3027210 0 wgd
Cone20ag1170 Cone-Chr20:7893649 Cone7ag0605 Cone-Chr7:2923857 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1170 K23025 - gmx:100803691 1385.55