Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone20ag1300 | ATGCAGTACCTAAACTCATTCTTCAACCAGCAAAAAAGAAAGACCATCATGTGGCCTCCATTCATGTTCTACACAAACACTAGTACTACTACAGCTCAGTACTTAGGCATGCTAATCACTGCGTTAATCCTCTTGACCACCATTATACTCTACGCCACCATTAATAACATGATAATCGCCTTTCAACGAAGACCGAAATCGTCATCAGCACGGAAAAATCTGCCAAAAGGCTCTCTCGGGCTGCCCCTTATCGGAGAAACCGTTCCGTTCATCTCTTCCGCTCTTTCTGACCGTCCCGAAACCTTTATGAACAAGCGCCGTGCCCTGTATGGGAAGGTGTTCAAGTCACATATATTTGGGAGTGCGACAATCGTATCGACCGATGCGGAAGTGAGTAGGGTAATTCTGCAAAGCGATGCGAAGGCTTTCGTGCCGTCTTATCCGAAATCCTTAACGGAATTAATGGGGAAGTCTTCTATCTTGCTTATGACAGGGAGTTTGCAAAGGAGGATTCATGGACTTGTTGGATCTTTCTTCAAGTCTCCTCACCTCAAAGCTCAAGTAACTGAAGACATGCAACACTATGTCAAGCAATCAATGGCAAGATGGAGTAGCACTACTCAATTTGATCATCATCATCCTATCTACCTTCAAGACGAATCAAAACATATTGCCTTTCAAGTACTTGTGAAGACACTGATAAGCTTAGAACCTGGTCAAGACATGGAGTTCCTCAAACACCAGTTCCGAGAATTCATCGCCGGCCTCATGTCTTTGCCCGTAAACTTACCCGGAACAAGACTCCATAGATCGTTACAGGCCAAAAGGAAGATGGTCAAGTTAGTTATGAAAACAATACAAGAGAGGAGAATGAATAGCAAAACTAGTACTCAGGTTCCAAAAGATGTGATGGATGTTTTGTTGATGAATGATTCAAGTGAAGAATTTACAGATGAGTTAATAGCAGGTAACATGATTGATATGATGATACCGGGTGAAGATTCCGTACCGCTTCTTATCACTCTTGCAATTAAGTATCTTTCCGATTGCCCTACCGCACGACAGCAATTAACGGAGGAAAATATGAAGATGAAAAGACTAAAAGCCCAACTTGGGGAGCCATTGCAATGGACTGATTACCTCTCACTGCCATTTACACAATCCGTAATTATAGAGACTCTAAGGATGGGGAATATTATAATAGGAGTGATGAGAAAAGCTGTAAATGACGTAGAGATAAAAGGATACTTCATACCAAAAGGATGGTCTATTTTTATTTATTTTAGATCGATTCATCTCGACGACAGTCTCTATAACTGCCCTCACCAGTTCAATCCATGGAGGTGGAAAGACAAAGACATGATGAACGGTTGCAACTTCACTCCGTTTGGTGGCGGGCAAAGGCTATGTCCTGGTCTTGACTTAGCCAAGCTGGAAGCTTCCATCTTTCTACACCATTTTGTCACTGAGTTCAGTTGGGTGGCTGAGGAGGATAGCATTATAAACTTCCCCACTGTAAGAATGAAAAAGAGGATGCCAGTTTGGGTCAAAAGAATAGTTGACCACTGA | 1569 | 42.51 | MQYLNSFFNQQKRKTIMWPPFMFYTNTSTTTAQYLGMLITALILLTTIILYATINNMIIAFQRRPKSSSARKNLPKGSLGLPLIGETVPFISSALSDRPETFMNKRRALYGKVFKSHIFGSATIVSTDAEVSRVILQSDAKAFVPSYPKSLTELMGKSSILLMTGSLQRRIHGLVGSFFKSPHLKAQVTEDMQHYVKQSMARWSSTTQFDHHHPIYLQDESKHIAFQVLVKTLISLEPGQDMEFLKHQFREFIAGLMSLPVNLPGTRLHRSLQAKRKMVKLVMKTIQERRMNSKTSTQVPKDVMDVLLMNDSSEEFTDELIAGNMIDMMIPGEDSVPLLITLAIKYLSDCPTARQQLTEENMKMKRLKAQLGEPLQWTDYLSLPFTQSVIIETLRMGNIIIGVMRKAVNDVEIKGYFIPKGWSIFIYFRSIHLDDSLYNCPHQFNPWRWKDKDMMNGCNFTPFGGGQRLCPGLDLAKLEASIFLHHFVTEFSWVAEEDSIINFPTVRMKKRMPVWVKRIVDH | 522 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 20 | 8462824 | 8466231 | - | Conep20aG0134600.1 | Cone20ag1300 | 461204 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone20ag1300 | 522 | PRINTS | E-class P450 group I signature | 460 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | PRINTS | E-class P450 group I signature | 387 | 405 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | PRINTS | E-class P450 group I signature | 470 | 493 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | PRINTS | E-class P450 group I signature | 107 | 126 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | PRINTS | E-class P450 group I signature | 427 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | SUPERFAMILY | Cytochrome P450 | 70 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | PRINTS | P450 superfamily signature | 461 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | PRINTS | P450 superfamily signature | 180 | 193 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | PRINTS | P450 superfamily signature | 470 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | PRINTS | P450 superfamily signature | 388 | 399 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 64 | 519 | - | - | |
| Cone20ag1300 | 522 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 463 | 472 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone20ag1300 | 522 | Gene3D | Cytochrome P450 | 64 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | CDD | CYP90-like | 106 | 514 | - | - | |
| Cone20ag1300 | 522 | Pfam | Cytochrome P450 | 75 | 499 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag1300 | 522 | PANTHER | CYTOCHROME P450 26 | 73 | 491 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone20ag1300 | Cone-Chr20:8462824 | Cone6ag1653 | Cone-Chr6:12616615 | 1.25E-166 | dispersed | |
| Cone20ag1300 | Cone-Chr20:8462824 | Cone9ag1578 | Cone-Chr9:11342020 | 4.22E-167 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone20ag1300 | K12638 | - | rcu:8266971 | 678.322 |