Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1339 ATGGCTAGATCTTCCATCTTCTTCGTCCTGTTCCTCTGTCTCTTCCCGGCCGTAACACTTTCACGCTCCTCCGACTCATCTGACAGTCTACAGACCTTCATCGTCCACGTGTCCAAATCACACAAGCCGCACCTCTTCTCATCCCACCACCACTGGTACACCTCCATCATCGAATCCCTCCCGCCTTCCCCACACGGTCCCACCAAGCTCCTCTACTCCTACAACCTCGCCGTGAATGGCTTCTCCGCCAGCCTCACCGCTGCTCAGGCTGAAAAGCTTCGCGAACTTCCCGGAATCGTCTCAGTCGTTCCCGATGAGATCCGTCACCTTCACACCACCCACACCCCTCATTTCTTAGGCCTCGCCGATACCTACGGCCTCTGGCCAAACTCCAACTACGCCAATGACGTCATCATCGGAGTACTCGACACCGGAATCTGGCCGGAACGACCTAGCTTCTCCGACTCGGGATTATCTCCCGTTCCGTACGGCTGGAAAGGCACCTGCGAGACTAGCAGTTCCTTCCCGAGCTGTAACAGAAAAATCATCGGAGCTAGGGCTTTCTACAGAGGATACGAATCTTACATAGGAGGATCAATGGACGAATCGGTTGAATCCAAATCTCCGAGAGACACAGAAGGCCATGGGACCCATACAGCCTCTACAGCTGCCGGTTCGTTTGTTTCAAACGCGAGCTTTTACCAATACGCTCCCGGTCAAGCCCGTGGCATGGCCTCGAAGGCCCGAATCGCTGCCTACAAGATCTGCTGGAGCTTCGGCTGTTTTGATTCCGACATTCTTGCTGCCATGGACCAGGCTATATCCGATGGAGTCCATGTAATCTCTCTCTCAGTTGGATCCAACGGTTACGCTCCTCAATATGATCATGACTCGATCGCGATCGGGGCATTCGGAGCAGCTGAGCACGGCGTCGTCGTGTCCTGTTCCGCGGGGAATTCCGGACCTGGCCCATACACTGCCGTGAACATCGCCCCATGGATTATAACTGTCGGAGCTTCCACCATCGATCGGGAGTTTCCGGCCGATGTAACCCTTGGTGATGGCAGAGTTTTCTCCGGTGTATCACTTTACTCGGGCGATCCCCTTTCTGACTCCAACCTCCCTTTAGTCTACGCTGGAGAGTCCGGAACCCGGTATTGCTATACGGGCAGACTTCAACCGTCAAAAGTTAAAGGAAAGATCGTGGTCTGTGATCGTGGTGGAAATGCTCGTGTTGCTAAAGGAAGTGCCGTAAAGCTAGCCGGAGGGGTGGGAATGATACTTGCAAATACAGAGGAAAGTGGGGAAGAATTAATCGCGGATTCTCATCTTATACCGACTACTATGGTGGGTCGAATTGCAGCCGATAAGATTAAAGACTATATCAATTTGAATCCTCACCCAACTGCAACGATTGAGTTTCGTGGGACCGTGATTGGAACCTCACTGCGTGCTCCAAAGGTCGCTGCTTTTTCGAGCCGTGGTCCAAATTATCGGACTGCAGAGGTTCTAAAGCCGGATGTTATAGCTCCAGGGGTTAACATATTAGCCGGGTGGACCGGGTTTACAAGCCCAACCGATCTGGACATTGATCCAAGAAGAGTGGAGTTTAACATAATTTCAGGTACTTCAATGTCTTGTCCTCATGTTAGTGGAATCGCCGCCTTGCTCCGAAAAGCATATCCTCAATGGTCCTCCGCTGCTATAAAATCCGCCCTAGTCACAACATCTTACAATTTGGACAATTCGGGTGCACAAATCACAGATCTCGCTACGGGAAAAGAGTCGAGTCCATTTATTCATGGGGCTGGACATGTCAACCCGAACCGTGCTCTCAATCCCGGATTGGTGTACGACATTGATGCAAGTGACTATGTAGCATTTCTTTGCTCTATCGGATATGATGCCAGGAGGATTTCTGTCTTTGTTCGGGAGCCTACTAGTACCGATATATGCAATCAAAGAGATATTGGTAGTCCGGGAAATCTCAATTATCCATCATTTAGCGTGGTTTTCGATTCGGACAGAGATTTCGTGAAGTATAAGAGATCTGTTACAAATGTTGGAAATGAAGCTGCGGTCTATGAAGCGAAAGTGAAGGCTCCGGAAGGTGTGGAAGTTAATGTGTCTCCAAGTAAGCTTGTGTTCGGTGAGGAGAACAAGACAGTGGGTTACGAAATTACGTTTGCTAGTAAAATCAATGATGTCGGAAGCTATTTGGAGAGGTTCGGGTCGATCGAGTGGTCGGACAGCACGCATCTTGTGAGAAGTCCAATTGCTGTTAGGTGGAGTAGTACTAATGGCTTTGCTGCTTCCATTTGA 2322 50.3 MARSSIFFVLFLCLFPAVTLSRSSDSSDSLQTFIVHVSKSHKPHLFSSHHHWYTSIIESLPPSPHGPTKLLYSYNLAVNGFSASLTAAQAEKLRELPGIVSVVPDEIRHLHTTHTPHFLGLADTYGLWPNSNYANDVIIGVLDTGIWPERPSFSDSGLSPVPYGWKGTCETSSSFPSCNRKIIGARAFYRGYESYIGGSMDESVESKSPRDTEGHGTHTASTAAGSFVSNASFYQYAPGQARGMASKARIAAYKICWSFGCFDSDILAAMDQAISDGVHVISLSVGSNGYAPQYDHDSIAIGAFGAAEHGVVVSCSAGNSGPGPYTAVNIAPWIITVGASTIDREFPADVTLGDGRVFSGVSLYSGDPLSDSNLPLVYAGESGTRYCYTGRLQPSKVKGKIVVCDRGGNARVAKGSAVKLAGGVGMILANTEESGEELIADSHLIPTTMVGRIAADKIKDYINLNPHPTATIEFRGTVIGTSLRAPKVAAFSSRGPNYRTAEVLKPDVIAPGVNILAGWTGFTSPTDLDIDPRRVEFNIISGTSMSCPHVSGIAALLRKAYPQWSSAAIKSALVTTSYNLDNSGAQITDLATGKESSPFIHGAGHVNPNRALNPGLVYDIDASDYVAFLCSIGYDARRISVFVREPTSTDICNQRDIGSPGNLNYPSFSVVFDSDRDFVKYKRSVTNVGNEAAVYEAKVKAPEGVEVNVSPSKLVFGEENKTVGYEITFASKINDVGSYLERFGSIEWSDSTHLVRSPIAVRWSSTNGFAASI 773
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
20 8632633 8635491 - Conep20aG0138500.1 Cone20ag1339 461243
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1339 773 SUPERFAMILY PA domain 364 436 IPR046450 -
Cone20ag1339 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Cone20ag1339 773 Gene3D Peptidase S8/S53 domain 136 625 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone20ag1339 773 Pfam PA domain 374 458 IPR003137 -
Cone20ag1339 773 Gene3D - 629 763 - -
Cone20ag1339 773 CDD Peptidases_S8_3 109 578 IPR034197 -
Cone20ag1339 773 CDD PA_subtilisin_like 349 472 - -
Cone20ag1339 773 FunFam Subtilisin-like protease SBT1.5 136 356 - -
Cone20ag1339 773 FunFam Subtilisin-like protease SBT1.5 629 764 - -
Cone20ag1339 773 FunFam subtilisin-like protease SBT1.5 343 479 - -
Cone20ag1339 773 MobiDBLite consensus disorder prediction 201 221 - -
Cone20ag1339 773 Gene3D - 343 479 - -
Cone20ag1339 773 SUPERFAMILY Protease propeptides/inhibitors 32 110 - -
Cone20ag1339 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 111 IPR037045 -
Cone20ag1339 773 Pfam Peptidase inhibitor I9 32 111 IPR010259 -
Cone20ag1339 773 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Cone20ag1339 773 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Cone20ag1339 773 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Cone20ag1339 773 Pfam Fibronectin type-III domain 662 761 IPR041469 -
Cone20ag1339 773 FunFam Subtilisin-like protease SBT1.9 21 111 - -
Cone20ag1339 773 SUPERFAMILY Subtilisin-like 110 616 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone20ag1339 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 759 IPR045051 -
Cone20ag1339 773 Pfam Subtilase family 135 588 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone20ag1339 773 ProSiteProfiles Serine proteases, subtilase domain profile. 116 612 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0367 Cone-Chr11:1797927 Cone20ag1339 Cone-Chr20:8632633 8.56E-241 dispersed
Cone20ag1339 Cone-Chr20:8632633 Cone6ag1437 Cone-Chr6:11515594 4.53E-258 dispersed
Cone17ag0065 Cone-Chr17:353909 Cone20ag1339 Cone-Chr20:8632633 0 wgd
Cone20ag1339 Cone-Chr20:8632633 Cone4ag0017 Cone-Chr4:97797 1.62E-251 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1339 - - - 0.0