Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1348 ATGGAGCCCTTTATTCCGCCTGAGGCTACTGAGATCATATTACGGTGGGATTCGACGGCGTCGGAGGAAGCTAGGGAGAGGATGATCTTCAAAGGTGACAGGGAGGAAGTCGATCGCTACTTACAGGCCGTGGATGAAATCCAACGCTCTATGTCATCCGTTTCTGTATCCGACAATCAGGCCAGAGTCAACACCACTCTGCATATCGCCATGGCTCGGTTGGAAGATGAGTTTCGGACTATTCTCATTACTCACACCAATCCGATCGAAGCTGAGTCGCTGCTTGATCCGACCTCCTCTACTCACTCGTCTTCCAATCTCGAAGGAGTATCCGAAGATGAAAATGAAGACGAATCCGCTGCGATCGGTAAGGAAGACGATCAGCTAAGTTGCATCGGTAGTCCAAGTTACAGGTCAAGTGGCCGATCAAGCTACCGATCAACGAGCAGCATCCGGGAGATCGATCTGATACCTTCCGATGCGATCGCCGATCTCAGAAGTATCGCAGAGAGAATGATTTCAGCTGGATATTTGCGCGAGTGCATCCAAGTCTACGGCAGTGTCAGAAAGTCCAACTTCGATTCAAGCTTCCGCAGGCTTGGAGTCGAGAAATTAAGCATCGGAGATATTCAGAGGCTCGAGTGGGGGGAGCTGGAAACGAAGATCAAACGGTGGATTAGGGCTGCACAAGTTTGTATCAGGATTTTATTCGCGAGCGAGAAGAAGCTCTGCGAACAAATTTTCTACGGAATAGGCACCGCCATAGACGACGCTTGTTTCATGGAAACCGTTAAAGGTCCAGCAATTCAGCTATTTAACTTCGCGGAAGCGATCAGTATAAGTCGTAGATCACCTGAAAAACTTTTCAAGATTTTAGAACTACATGATGCGTTAATGGACATGACAGCTGATATAGACGCCGTATTCGACTCGAAATCAGCTGAATCGATCCGAGTTCAAGGGGCCGAGATCGTTTCGAGATTAGCAGAGGCTGTTAGGGGGATTTTATCAGAATTTGAGAACGCTGTGCTTTCCGAATCCTCATTGGTCCCGGCAAATGGAACAATTCATCCCATGACCAAGTACGTAATGAACTACATCAGTCTTATGTGTGAATACAAACAGACCTTATTCGAGCTCATAGTCTCAAAGCCATCAGCCGGGTTCAGGAACTCAGCTGATCTCTCAACCCCGGAATCGGAGATTCCAGAGGCAGAAGATAAAACACCATTAGAACTCCATTTCATCTGGATCATAGCCATTTTGCTACACAGTTTAGAAGGTAAGTCTAAGCACTACAAAGATAGTTCCTTAACCCAACTGTTCATCATGAACAATGTTCACTACATTGTTTATAAGGTAAAAGGGTCGCCTGAAATGCGAGATATGATAGGAGACAATTATTTGAGGAAGCTCACCGGCAAATATCGTCAGGCAGCGACTAGCTACCAGAGAGGGACTTGGGTCAGAGTATTGAATTGCTTAAGAGAAGAAGGTTTACATGTGAGTGGGAGTTTCTCTTCTGGAGTCTCAAAGAGTGTTTTGAGAGAGAGGTTTAAGGCCTTTAATGGTGTGTTTGAGGAGGTTCATAGGACTCAATCGGCTTGGTTGGTTCCGGATTTTCAGCTTAGAGAGGAGCTACGCATATCTATAGCCGAAAAGTTGATTCCGGCTTATAGGTCGTTTCTAGGGAGGTTTAGACTTCAAATAGAGAGTGGGAAGCACCCAGAAAGTTTCATCAAGTACTCCATTGAGGATTTAGAGAATGCGGTCTCGGATTTCTTCGAGGGTCACTCTGCTTCACTGCTATTAAGGAGGAGATCTCAGTGA 1830 46.17 MEPFIPPEATEIILRWDSTASEEARERMIFKGDREEVDRYLQAVDEIQRSMSSVSVSDNQARVNTTLHIAMARLEDEFRTILITHTNPIEAESLLDPTSSTHSSSNLEGVSEDENEDESAAIGKEDDQLSCIGSPSYRSSGRSSYRSTSSIREIDLIPSDAIADLRSIAERMISAGYLRECIQVYGSVRKSNFDSSFRRLGVEKLSIGDIQRLEWGELETKIKRWIRAAQVCIRILFASEKKLCEQIFYGIGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILELHDALMDMTADIDAVFDSKSAESIRVQGAEIVSRLAEAVRGILSEFENAVLSESSLVPANGTIHPMTKYVMNYISLMCEYKQTLFELIVSKPSAGFRNSADLSTPESEIPEAEDKTPLELHFIWIIAILLHSLEGKSKHYKDSSLTQLFIMNNVHYIVYKVKGSPEMRDMIGDNYLRKLTGKYRQAATSYQRGTWVRVLNCLREEGLHVSGSFSSGVSKSVLRERFKAFNGVFEEVHRTQSAWLVPDFQLREELRISIAEKLIPAYRSFLGRFRLQIESGKHPESFIKYSIEDLENAVSDFFEGHSASLLLRRRSQ 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 8666061 8667890 - Conep20aG0139400.1 Cone20ag1348 461252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1348 609 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 597 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone20ag1348 609 Pfam Exocyst complex component Exo70 N-terminal 9 83 - -
Cone20ag1348 609 MobiDBLite consensus disorder prediction 92 108 - -
Cone20ag1348 609 Pfam Exo70 exocyst complex subunit C-terminal 223 593 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone20ag1348 609 SUPERFAMILY Cullin repeat-like 23 596 IPR016159 -
Cone20ag1348 609 MobiDBLite consensus disorder prediction 92 144 - -
Cone20ag1348 609 Gene3D Exocyst complex component Exo70 12 603 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0284 Cone-Chr10:1348849 Cone20ag1348 Cone-Chr20:8666061 4.06E-94 dispersed
Cone11ag1101 Cone-Chr11:8582489 Cone20ag1348 Cone-Chr20:8666061 3.25E-83 dispersed
Cone13ag0215 Cone-Chr13:1391865 Cone20ag1348 Cone-Chr20:8666061 1.69E-144 dispersed
Cone18ag0474 Cone-Chr18:2306911 Cone20ag1348 Cone-Chr20:8666061 2.92E-82 dispersed
Cone19ag0206 Cone-Chr19:1303296 Cone20ag1348 Cone-Chr20:8666061 4.68E-141 dispersed
Cone19ag1300 Cone-Chr19:8771675 Cone20ag1348 Cone-Chr20:8666061 6.50E-86 dispersed
Cone1ag0674 Cone-Chr1:6316183 Cone20ag1348 Cone-Chr20:8666061 1.01E-107 dispersed
Cone1ag1422 Cone-Chr1:56849045 Cone20ag1348 Cone-Chr20:8666061 6.81E-109 dispersed
Cone20ag1348 Cone-Chr20:8666061 Cone5ag0416 Cone-Chr5:1766096 9.76E-108 dispersed
Cone17ag0057 Cone-Chr17:321235 Cone20ag1348 Cone-Chr20:8666061 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1348 K07195 - rcu:8279032 855.129