Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1361 ATGGCTCTTCTTGCGAGTCATCTCCTTCCTCTCTTTCTCATCCCGCTTCTCCTTTCCCATTCTTCTTCGTCCAGGGCTGCTGATGTGAAGAAGACATTCATAGTTCAGGTCCATTTAGATGCCAAACCTTCTATTTTCCCAACCCATAAGCACTGGTATGAGTCCTCTCTCTCTTCCCTATCATCCGCCGGAGGAACGACGTCATCTGTTATTCACACTTACGACACTGTTTTCCACGGCTTCTCCGCAAAGCTCTCACCTTTCCAAGTCGAGAAGCTTCAAAACCTTCCACAAGTCATCTCCGTCATACCCGAACAGGTCCGCCACCTCCACACTACCCGCTCGCCGGAGTTCCTTGGCCTCAAAACCACCGACAGTGCCGGCCTCCTCAAAGAATCTGACTTCGGATCCGACCTCGTCATCGGAGTCATTGACACTGGTATCTGGCCGGAGCGACAGAGCTTCCACGATCGCGATCTGGGTCCCGTCCCGTCTAAATGGAAAGGCCAGTGCCTCGCTGGAAAAGACTTCCCTTTCACTTCCTGCAACCGCAAACTCATCGGAGCCAGATACTTCTGCGACGGTTACGAAGCGACCAACGGAAAGATGAATGAGACAACGGAATACCGCTCTCCGAGAGACTCCGACGGCCACGGGACCCACACCGCCTCGATCGCCGCCGGAAGGTACGTATTTCCAGCTTCAACTCTGGGATATGCTCGTGGCATGGCTGCCGGAATGGCTCCTAAAGCCCGTCTAGCTGCCTACAAAGTCTGCTGGAATGCTGGCTGCTACGACTCCGACATTCTCGCCGCCTTCGACGTCGCTGTATCCGACGGCGTCGATGTTGTCTCCCTCAGTGTCGGAGGTGTCGTGGTTCCCTACTACCTAGACTCTATAGCCATAGGTGCTTTCGGGGCAGTAAATGCTGGAGTTTTTGTCTCTGCCTCGGCTGGAAACGGTGGGCCCGGTGGGCTCACGGTGACCAACGTGTCGCCATGGGTGACCACTGTTGGAGCCGGAACAATAGACCGAGATTTTCCAGCTGACGTCAAGCTCGGCAACGGAAAAGCCATACCCGGAGTAAGTATCTATGGCGGGCCGATGCTGAGTCCGGGTCGGTTTTACCCAGTTGTTTATGCCGGTACGGAAGGTGGGGATGGTTATTCCTCGTCCTTGTGTTTAGAAGGTTCACTAGACCCGACTTCTGTTAGAGGCAAAATCGTGGTGTGTGATAGAGGGATTAATTCAAGAGCTACAAAAGGTGAGGTTGTGAAAAAAGCAGGTGGGATTGGAATGATATTAGCAAATGGAGCCTTTGATGGGGAAGGATTAATTGCTGATTGTCATGTCTTACCCGCCACCTCAGTCGGGGCAGCTAATGGGGAGAGGATCCGGAAGTACATTACGGAAGCTTCTAAATCCCCGTCGCCTCCAACTGCCACGATCGTGTTTAGAGGGACCCGCGTTGGAGTCAGGCCCGCTCCAGTTGTGGCATCATTTTCCGCTAGAGGCCCCAACCCTGAATCCCCGGAAATATTGAAGCCAGATGTGATTGCACCCGGCTTGAACATTCTTGCTGCTTGGCCCGATAAAGTTGGCCCGTCCGGAATTCCTTCGGATAAACGCACGACAGAGTTTAATATTCTTTCAGGTACTTCAATGGCTTGCCCCCATGTTTCGGGCCTAGCTGCATTGTTGAAGGCTGCCCATCCAGAGTGGAGTCCAGCTGCGATAAGATCGGCCCTCATGACAACTGCTTATACTGTGGATAATAAAGGTATTACAGAAACAATGTTGGATGAATCCACCGGGAATGTTTCAACCGTGTTGGATTTTGGTTCGGGTCATGTTCACCCGCAAAAGGCGATGGATCCGGGTCTAATCTACGATGTAACTGGATACGACTATATAGATTTCTTATGCAATTCGAATTACACAACAAAGAATATTCAAGTGGTTACGAGGAAGATTGCGGACTGTAGTGGGGCGAAAAGGGCGGGGCATTCTGGTAACTTGAATTACCCGTCATTATCTGTGGTGTTCCAACAATACGGGAAGCATAAGATGAACACACATTTCATTAGGAAAGTAACCAATGTGGGTGAGCCGAGGTCGACTTATCGGGTCACAGTAAAGCCACCAAGTGGGGTGGCGGTTACGGTAGAGCCAGAGAAGCTCGTGTTTAGGAGGGTAGGGCAGAAGTTGAACTTCTTGGTCAGGGTTAATGCCATGGCTGTAAAGCTTTCCCCCGGAAGCTCTAGCATGAAGAGTGGTGCCATCGTTTGGTCCGATGGGAAGCACACGGTGACTAGTCCTTTGGTTGTTACCATGCAACAACCTTTGGAGTAG 2352 51.62 MALLASHLLPLFLIPLLLSHSSSSRAADVKKTFIVQVHLDAKPSIFPTHKHWYESSLSSLSSAGGTTSSVIHTYDTVFHGFSAKLSPFQVEKLQNLPQVISVIPEQVRHLHTTRSPEFLGLKTTDSAGLLKESDFGSDLVIGVIDTGIWPERQSFHDRDLGPVPSKWKGQCLAGKDFPFTSCNRKLIGARYFCDGYEATNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGMAAGMAPKARLAAYKVCWNAGCYDSDILAAFDVAVSDGVDVVSLSVGGVVVPYYLDSIAIGAFGAVNAGVFVSASAGNGGPGGLTVTNVSPWVTTVGAGTIDRDFPADVKLGNGKAIPGVSIYGGPMLSPGRFYPVVYAGTEGGDGYSSSLCLEGSLDPTSVRGKIVVCDRGINSRATKGEVVKKAGGIGMILANGAFDGEGLIADCHVLPATSVGAANGERIRKYITEASKSPSPPTATIVFRGTRVGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDKVGPSGIPSDKRTTEFNILSGTSMACPHVSGLAALLKAAHPEWSPAAIRSALMTTAYTVDNKGITETMLDESTGNVSTVLDFGSGHVHPQKAMDPGLIYDVTGYDYIDFLCNSNYTTKNIQVVTRKIADCSGAKRAGHSGNLNYPSLSVVFQQYGKHKMNTHFIRKVTNVGEPRSTYRVTVKPPSGVAVTVEPEKLVFRRVGQKLNFLVRVNAMAVKLSPGSSSMKSGAIVWSDGKHTVTSPLVVTMQQPLE 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 8737502 8740082 - Conep20aG0140800.1 Cone20ag1361 461265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1361 783 Pfam Subtilase family 136 605 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone20ag1361 783 Gene3D - 641 779 - -
Cone20ag1361 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 56 774 IPR045051 -
Cone20ag1361 783 FunFam Subtilisin-like protease SBT1.5 138 357 - -
Cone20ag1361 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Cone20ag1361 783 Pfam Peptidase inhibitor I9 32 111 IPR010259 -
Cone20ag1361 783 Gene3D - 344 491 - -
Cone20ag1361 783 SUPERFAMILY Protease propeptides/inhibitors 30 110 - -
Cone20ag1361 783 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Cone20ag1361 783 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Cone20ag1361 783 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Cone20ag1361 783 FunFam Subtilisin-like protease SBT1.9 21 111 - -
Cone20ag1361 783 CDD PA_subtilisin_like 350 483 - -
Cone20ag1361 783 Pfam PA domain 376 465 IPR003137 -
Cone20ag1361 783 CDD Peptidases_S8_3 109 588 IPR034197 -
Cone20ag1361 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Cone20ag1361 783 Gene3D Peptidase S8/S53 domain 138 637 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone20ag1361 783 ProSiteProfiles Serine proteases, subtilase domain profile. 115 624 - -
Cone20ag1361 783 SUPERFAMILY Subtilisin-like 110 628 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone20ag1361 783 Pfam Fibronectin type-III domain 672 776 IPR041469 -
Cone20ag1361 783 FunFam subtilisin-like protease SBT1.5 344 490 - -
Cone20ag1361 783 FunFam p69E protein-like 641 779 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0826 Cone-Chr18:5518999 Cone20ag1361 Cone-Chr20:8737502 2.04E-209 dispersed
Cone20ag1361 Cone-Chr20:8737502 Cone8ag1278 Cone-Chr8:10541907 1.20E-296 dispersed
Cone18ag0732 Cone-Chr18:3976338 Cone20ag1361 Cone-Chr20:8737502 3.04E-239 transposed
Cone17ag0039 Cone-Chr17:246918 Cone20ag1361 Cone-Chr20:8737502 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1361 - - - 0.0