Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1363 ATGATGTGGTGGAGATCAGCCTCTTTCATTTGCGACAAGCAGCTAAACCACGAAGCTTCTGAAACCGAAACTCTCTCTCTTTCTCCACCTACTAACTACTCCATGGCCGACACCTTCCAGAACCCTAACTCGAAGGTCTCCGCCTACTATCAGAGCAGGGCGGCTCATACCGGTGTGGTCACCAGCGACTGGCTCGCCCAGGCTCAGGCAGCCGTCGCCAGCCAGTCCGATGACCTCACTGCACCCAAGACTGATGTTATATCCTCCTCCTTTTCCACCAAACCGTTCTGTGTAATCGATGAGTTTAATAACTGGCGGAAACAGCCTGATTTGGCTGAAGCAGTGGCGGCGATTCGGGCCTTGGCTGCTGTCATTCGTTCCAGCGAGGCCACGACTATGATGGAGCTCGAAATTGAGCTGAAGAAGGCTTCAGACTCTCTAAAGTCATGGGACACAACCTCAATCTCTTTAACAGCGGGCTGTGATTTGTTCATGCGGTATGTAACAAGAACAGCAGCTTTAGAATACGAGAACTTCAATTCAGCTAGGAGTCGCTTGATTGAACGTGCAGAAAAATTTGGGGAAATTTCTTATAAGGCTCGTAGAATCATTGCAATGCTCAGTCAAGAATTTATCTTTGATGGTTGTACCATTTTGGTTCATGGTTTTTCTCGAGTTGTTATGGAAGTTCTAAAGATCGCTGCACAGAATAAGAAGTTCTTCAGAGTATTCTGCACAGAGGGAAGACCAGACAGAACGGGTCTAAGATTGTCGAACGAGCTGGCCAAGCTTGATGTTCCCGTGAAGCTCCTTATCGACTCTGCAGTAGCTTATGCCATGGATGAGGTCGATATGGTACTTGTTGGGGCAGATGCAGTGGTTGAAAGTGGAGGAATCATAAACATGATGGGCACATATCAGATCGCATTAGTAGGCCACAGCATGAACAAGCCAATGTATGTGGCTGCTGAGAGCTACAAGTTTGCTCGCCTGTATCCATTGGACCAGAAAGACATGGCCCCTGCCTTGCGCCCGATTGATTTTGGAGTACCCATCCCGTTCAAAGTGGAGGTGGAAAAGTCAGCTCGGGATTATACGCCTCCCCAGTATCTTACTCTTCTCTTTACGGATTTGGGTGTTCTTACTCCATCTGTGGTGAGCGACGAGCTCATCCAACTCTACTTGTAG 1188 48.32 MMWWRSASFICDKQLNHEASETETLSLSPPTNYSMADTFQNPNSKVSAYYQSRAAHTGVVTSDWLAQAQAAVASQSDDLTAPKTDVISSSFSTKPFCVIDEFNNWRKQPDLAEAVAAIRALAAVIRSSEATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTAALEYENFNSARSRLIERAEKFGEISYKARRIIAMLSQEFIFDGCTILVHGFSRVVMEVLKIAAQNKKFFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYAMDEVDMVLVGADAVVESGGIINMMGTYQIALVGHSMNKPMYVAAESYKFARLYPLDQKDMAPALRPIDFGVPIPFKVEVEKSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 8743825 8746096 - Conep20aG0141000.1 Cone20ag1363 461267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1363 395 Coils Coil 133 153 - -
Cone20ag1363 395 Pfam Initiation factor 2 subunit family 108 383 IPR000649 GO:0044237(InterPro)
Cone20ag1363 395 FunFam Translation initiation factor eIF-2B subunit alpha 199 395 - -
Cone20ag1363 395 SUPERFAMILY NagB/RpiA/CoA transferase-like 111 394 IPR037171 -
Cone20ag1363 395 Gene3D - 96 196 IPR042528 -
Cone20ag1363 395 Gene3D - 199 395 IPR042529 -
Cone20ag1363 395 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 93 395 IPR051501 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
Cone20ag1363 395 FunFam Translation initiation factor eIF-2B subunit alpha 94 196 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0825 Cone-Chr1:54088214 Cone20ag1363 Cone-Chr20:8743825 6.16E-19 dispersed
Cone20ag1363 Cone-Chr20:8743825 Cone5ag0997 Cone-Chr5:4296577 9.93E-20 dispersed
Cone17ag0038 Cone-Chr17:238632 Cone20ag1363 Cone-Chr20:8743825 1.29E-261 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1363 K03239 - csv:101211420 656.366