Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag1385 ATGGAGGCTGGTCAGGATTCCGGGAGACAGCTCCCTGACGATGGAGAAGATGGATCTTCGTCTGTTTCTGATCCCTTCGATATTGAGAATACCAAGAATGCGTCATCGGCTTCTCTCAAGCGCTGGCGGGAGGAGGAGAAAGAGCAGAGAAGGACGATGCTTAGAGCCCATGCACAAGCATCATTGCTTTTCAAATTGGCTGGGGAATGGCAAATTGTGGTAGATTCATCAGTATCATTTCCTCCAGCTGCAAAGGGTGATTATGAAATTGAACAAGACCAGCTTGCTACGTTGACTAGGGAACAAAATTTTTCTGCACTACAAGAATATGAAGGGGTTACAGGATTATCAAACTTGTTAAAAACAAACCTAGAGAAGGGAATTATTGGCGATGAAGCTGATTTAGCGAAGAGGAAGAATGCCTTTGGATCAAATACCTATCCGCATAAAAAGGGGCGGAGTTTCTGGCAGTTCCTATGGGAAGCTTGGCAAGATTTGACCCTCATCATCCTGATTATAGCTGCTGTCCTGTCATTGGTGTTGGGAATTAAAACAGAGGTACTTGTTTGTGAATTTGTTCATCCGAAACTTGGTGAGATCAGAGTTGAAGATACCAATTTGATCTTTTTATGTATGGTACAGGCTTTGTATCAGGTTGCTGTCCTCCTTGTTCTTAATTTCCGTGGATTGGATCTTCTTGATTTGAATCATGAGAGCACATTATTCAACGAGTTTAATGCTCAGAAGCCAGAGGAATTAAATGTGTTCGCCGGAGTGACCAAAAATCATCTCTTTTTGGGAGTGATCGCAATCACGGCTGTACTTCAGATTATCATTGTTGAGTTTCTCGGAAAGTTTACGAAAACAGTAAAACTCAACTGGGTGCAATGGGTTGTTAGCATTGGTCTCAGCACTGTCAGTTGGCCTCTGGCTGTAGTCGGAAAGTTCATTCTGGTTCCCAAGATGCGGTGGCCAGGTAAGCTTTGCTGCTTATTCTTGACTCGGTTTGCATTTCACAGATTTCTCCCTGGTCTCGTTGTGATGCCTCTCGTGTTTGTTAGATCTGATATTTCCTCGACCATTGCTCTGCCTGTGTTTCTTGTTTTCCTTTTCTCATTTCCAGATCCATAA 1131 43.32 MEAGQDSGRQLPDDGEDGSSSVSDPFDIENTKNASSASLKRWREEEKEQRRTMLRAHAQASLLFKLAGEWQIVVDSSVSFPPAAKGDYEIEQDQLATLTREQNFSALQEYEGVTGLSNLLKTNLEKGIIGDEADLAKRKNAFGSNTYPHKKGRSFWQFLWEAWQDLTLIILIIAAVLSLVLGIKTEVLVCEFVHPKLGEIRVEDTNLIFLCMVQALYQVAVLLVLNFRGLDLLDLNHESTLFNEFNAQKPEELNVFAGVTKNHLFLGVIAITAVLQIIIVEFLGKFTKTVKLNWVQWVVSIGLSTVSWPLAVVGKFILVPKMRWPGKLCCLFLTRFAFHRFLPGLVVMPLVFVRSDISSTIALPVFLVFLFSFPDP 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 8835107 8838714 + Conep20aG0143200.1 Cone20ag1385 461289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag1385 376 Pfam Cation transporting ATPase, C-terminus 239 316 IPR006068 -
Cone20ag1385 376 MobiDBLite consensus disorder prediction 23 37 - -
Cone20ag1385 376 SUPERFAMILY Calcium ATPase, transmembrane domain M 206 320 IPR023298 -
Cone20ag1385 376 PANTHER CATION TRANSPORTING ATPASE 211 319 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Cone20ag1385 376 SMART Cation_ATPase_N_a_2 109 183 IPR004014 -
Cone20ag1385 376 MobiDBLite consensus disorder prediction 1 44 - -
Cone20ag1385 376 Pfam Cation transporter/ATPase, N-terminus 111 178 IPR004014 -
Cone20ag1385 376 SUPERFAMILY Calcium ATPase, transmembrane domain M 112 183 IPR023298 -
Cone20ag1385 376 Gene3D - 239 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag1385 Cone-Chr20:8835107 Cone2ag0665 Cone-Chr2:31727612 1.68E-41 dispersed
Cone17ag0021 Cone-Chr17:157509 Cone20ag1385 Cone-Chr20:8835107 1.33E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag1385 K01537 - csv:101214801 205.682