Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0034 ATGAAAGTTTCAGACTTTTCAGGTCACCTTCTTCAATCAAAGGTTGCCCCTTTTCTTCCTAATTCTTCTCAATTTTTCTTTTCTATTTTCCCCCTACTTTTGTTATTTGCCTCTCTGTCCATGGATCCCAAGGGCTCAACGACATCAAATTTCTTGACATCAAACATGGGTGAAAACAACAACAGCAACAGCAATACCAACACCAACAGCAACAAACCTGCTGAAATCAAAGACTTCCAGATTGTAATAGCAGAGAAAGAAGAAGGGAAGAAGCAATTAGCTCCCAAAAGAAGCTCAAACAAAGATAGACACACAAAAGTTGAAGGTAGAGGGAGAAGGATAAGGATGCCAGCTCTATGTGCAGCAAGGATATTCCAATTAACCAGAGAATTAGGTCACAAATCAGATGGGGAAACAATCCAATGGCTTCTACAGCAAGCAGAGCCATCAATAATTGCAGCCACAGGGACTGGAACTATTCCAGCCTCTGCTCTAGCCGCATCAGGTGTGTCGATTTCACATCAGACGGCTACTTTATCATCTGGGTTACATTCAAAACTTGATGAAATGGGTGGTGGGTCCGGATTTGGGCCAGGAAGCAGTAGGACCAGCTGGGCTAATTTGGGTCGGACCCATGTGGCGGCGACAGGATTGTGGCCACCTGTCAGTGGATTCTCTTCTTCTGCTACAAATTTGGGGACTGAAAGCTCAAATTATTTGCAGAAAATGGGATTCCCTGGCTTTGATTTTGGTGGGAATAATAACATGAATGCTATGAGTTTTACTTCTATTTTAGGTGGGACCAATAATACCAATCAACACCTGCCTGGGCTAGAGCTTGGCTTGTCTCAAGACGGTCATATTGGAGTTTTAAATCCACAAGCTTTGACTCAGATGTATCAGCAGGTGGGTCATAGGGTTCAGCTTCCGCACCACCACCAGCAACCGCCTCAGCCTCCACCTCAGCACCACCATCAACAGCAGCAGCAGCAGCAAGATGGTACCAAGGATGATTCTGAAGATTCAGGACAGTAG 1035 44.83 MKVSDFSGHLLQSKVAPFLPNSSQFFFSIFPLLLLFASLSMDPKGSTTSNFLTSNMGENNNSNSNTNTNSNKPAEIKDFQIVIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAASGVSISHQTATLSSGLHSKLDEMGGGSGFGPGSSRTSWANLGRTHVAATGLWPPVSGFSSSATNLGTESSNYLQKMGFPGFDFGGNNNMNAMSFTSILGGTNNTNQHLPGLELGLSQDGHIGVLNPQALTQMYQQVGHRVQLPHHHQQPPQPPPQHHHQQQQQQQDGTKDDSEDSGQ 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 186883 188424 - Conep02aG0003400.1 Cone2ag0034 432501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0034 344 MobiDBLite consensus disorder prediction 89 109 - -
Cone2ag0034 344 MobiDBLite consensus disorder prediction 50 72 - -
Cone2ag0034 344 Pfam TCP family transcription factor 99 295 IPR017887 -
Cone2ag0034 344 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 62 328 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Cone2ag0034 344 MobiDBLite consensus disorder prediction 307 344 - -
Cone2ag0034 344 MobiDBLite consensus disorder prediction 330 344 - -
Cone2ag0034 344 ProSiteProfiles TCP domain profile. 100 154 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1521 Cone-Chr1:57261889 Cone2ag0034 Cone-Chr2:186883 1.15E-30 dispersed
Cone2ag0034 Cone-Chr2:186883 Cone3ag0268 Cone-Chr3:1397966 6.96E-31 dispersed
Cone11ag0038 Cone-Chr11:200499 Cone2ag0034 Cone-Chr2:186883 1.92E-84 wgd
Cone16ag1006 Cone-Chr16:9820009 Cone2ag0034 Cone-Chr2:186883 2.99E-165 wgd
Cone18ag1441 Cone-Chr18:9703268 Cone2ag0034 Cone-Chr2:186883 1.22E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45676 PF02365 NAM 1.80E-23 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0034 - - - 0.0