Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0042 ATGATGGGTAGGTTGAACGAGAAGCTAATAGCATTATTTAGCAACAGATGGTTAGTTTTCGTGGCAGCAATGTGGATACAATCCTGTGCGGGAGTCGGCTACTTATTTGGAAGTATTTCGCCGGTGATTAAGAAGAACTTGAACTACAATCAGCGGAAGATTTCACGTCTGGGCGTCGCTAAAGACCTTGGTGATAGTGTTGGCTTTTTTGCTGGAAGTTTGTGTGAGATTTTGCCTTTCTGGGGTGCTCTGCTTGTTGGTGCTTTCAAGAATTTTATCGGGTATGGCTGGGTTTGGTTAGTTGTTACTGGTAAAGCTCCTCCTTTGCCTTGGTGGGCTATGTGCATTCTCATATTTGTGGGAACAAATGGTGAGACCTACTTCAACACAGTATCCCTTGTTTCTTGCGTCCAAAACTTCCCGAAAAGCCGGGGTCCAGTAGTCGGAATCCTGAAGGGCTTTGCTGGGTTAAGTGGTGCAATCTTAACCCAAATATACACAATGATCCACTCCCCCGATCACGCAAACCTCATCTTCATGATCGCTGTGGGTCCTGCAATGGTAGCCATCGGTATGATGTTCTTAGTCCGGCCGGTCGGAGGCCACAGGCAAATCCGAACAACCGATGAAATTAGCTTCACTTTCATTTATAGCATGTGCCTCCTTTTAGCCGCATATTTAATGGGAATCATGCTTGTTGAAGATCTTATCGATTTGAACCGTAAAATCATAATTGTATTTACTGCCATCTTGTTCGTAATTATTCTCTTACCCATCGCAATTCCCATAACATTAACATTCAAGTCCAATCCCAGAGCATCCGAACAAGAGCATCTCCTATCGGGCCCTCAAAAACTGGAAGTTGGAAAATCCAAATTGGACGATCATCATGAGGTGATATTTAGTGAGGTAGAAGATGAGACACCTAAGGAGGTGGAGGCGTTTTCCTTATCAGATAGACAAAAGCGGATTGCTCAATTGCAAACGAAGATATTGCAAGCGGCCGCAGAAGGAGCGGTGAGGGTCAAGAGGAGACGGGGTCCGCATAGAGGGGAGGACTTCACTTTGGTACAAGCATTGATCAAAGCCGATTTTTGGCTTATTTTTTTCTCCCTTCTTTTAGGTTCAGGCACAGGATTGACCGTGATTGATAACCTTGGCCAAATGAGTCAATCTTTGGGTTATGAGAATACACATATTTTTGTATCCATGATTAGTATATGGAACTTTCTTGGTCGGGTTGGAGGCGGTTACTTCTCCGAAATTGTCGTCAGGGATTATGCTTATCCGAGACCAATAGCAATGGCTATTGCACAATTTATTATGGTGATAGGTCATGTCTTCATAGCTAATGGATGGCCCGGAGCTATGTACGTTGGTACTCTATTGACAGGGCTTGGTTACGGTGCACACTGGGCTATAGTGCCGGCAACGGCATCAGAGTTGTTTGGGCTGAGAAAATTTGGGGCATTGTACAATTTCCTCACACTAGCAAACCCTTTAGGGTCATTAGTATTTTCGGGTATAATTGCAAGCAGTATATATGATAGTGAGGCGGAGAAGCAAGCTCATAATCATCACCATGGTTCCAAAATTTTATTTAGCTTGCTTGATCTGGATGCAGCACCAAAATGTGAAGGTACAATATGTTTCTTTCTCACATCCTTAATAATGGCCGGATTCTGCATTGTTGCAGGCATTTTAAGCCTGATTTTGGTCTATAGAACGAAGATTGTTTATACTCATCTATACGGAAAATCTCGTACAGTCGGAGTTTAA 1779 43.45 MMGRLNEKLIALFSNRWLVFVAAMWIQSCAGVGYLFGSISPVIKKNLNYNQRKISRLGVAKDLGDSVGFFAGSLCEILPFWGALLVGAFKNFIGYGWVWLVVTGKAPPLPWWAMCILIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYTMIHSPDHANLIFMIAVGPAMVAIGMMFLVRPVGGHRQIRTTDEISFTFIYSMCLLLAAYLMGIMLVEDLIDLNRKIIIVFTAILFVIILLPIAIPITLTFKSNPRASEQEHLLSGPQKLEVGKSKLDDHHEVIFSEVEDETPKEVEAFSLSDRQKRIAQLQTKILQAAAEGAVRVKRRRGPHRGEDFTLVQALIKADFWLIFFSLLLGSGTGLTVIDNLGQMSQSLGYENTHIFVSMISIWNFLGRVGGGYFSEIVVRDYAYPRPIAMAIAQFIMVIGHVFIANGWPGAMYVGTLLTGLGYGAHWAIVPATASELFGLRKFGALYNFLTLANPLGSLVFSGIIASSIYDSEAEKQAHNHHHGSKILFSLLDLDAAPKCEGTICFFLTSLIMAGFCIVAGILSLILVYRTKIVYTHLYGKSRTVGV 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 219837 222490 + Conep02aG0004400.1 Cone2ag0042 432509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0042 592 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Cone2ag0042 592 SUPERFAMILY MFS general substrate transporter 9 204 IPR036259 -
Cone2ag0042 592 Gene3D MFS general substrate transporter like domains 361 577 IPR036259 -
Cone2ag0042 592 SUPERFAMILY MFS general substrate transporter 215 577 IPR036259 -
Cone2ag0042 592 CDD MFS_Mch1p_like 16 565 - -
Cone2ag0042 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 580 - GO:0016020(PANTHER)
Cone2ag0042 592 FunFam Nodulin family protein 356 582 - -
Cone2ag0042 592 Pfam Nodulin-like 16 263 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag1163 Cone-Chr20:7857844 Cone2ag0042 Cone-Chr2:219837 1.75E-115 dispersed
Cone2ag0042 Cone-Chr2:219837 Cone2ag0382 Cone-Chr2:2013854 3.30E-115 dispersed
Cone2ag0982 Cone-Chr2:35271259 Cone2ag0042 Cone-Chr2:219837 4.22E-247 transposed
Cone11ag0045 Cone-Chr11:219975 Cone2ag0042 Cone-Chr2:219837 1.12E-211 wgd
Cone18ag1436 Cone-Chr18:9679187 Cone2ag0042 Cone-Chr2:219837 2.66E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0042 - - - 0.0