Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone2ag0044 | ATGGCAAAGTACTGGTGGAGGACATTACTTTTTGCAACAATTTTGATGTATTTGGGCACAGGAGAAGGCATTTTGGTGACGAATTATTACAGCTCAACTTGTCCAAATGTAGAACAAATCGTAAGGCAAGCAGTGCAGACAAAGATAAACCAGACATTCGTCACTGTCCCGGCAACTCTCCGCCTTTTCTTCCACGACTGTTTTGTCGACGGATGTGACGCTTCGGCCATGATTGCAAGTGCAAATGGAGACGCAGAGAAAGATGCACCTGAAAATGTTTCTTTGGCCGGGGATGGGTTCGACACGGTTATCAAGGCTGAGACGGCAGTTGAATCAGCCTGTCCGGGCATTGTCTCTTGCGCTGTCGTCCTGGCCATTGCTGCAAGAGACGTCAATTGGGCCCGCCTTGATGGGCTAGTGTCATCTGCCTCTCGGGTTGCCGGTAACCTCCCCGGTCCATCCTTCAACGTGACCCAGCTCAACGCCTTGTTCGCCAAAAACAACCTCACCCAAACCGACATGATAGCCCTCTCGGGAGCCCACACCGTGGGATTTGCGCACTGCAACCGCTTTGCAAACCGTCTCTATAACTTTTCTTCTTCCTCTTCGGTCGATCCGTCCCTCGACTCAAACTATGCACAACAACTAATGCAAGCTTGCCCTCAAAATGTGGACCCGAGAATTGCCATTGACATGGATCCAGTGACCCCACGGAAATTTGATAACGTTTATTACCAGAATCTCGTCGATCGTAAGGGTTTGTTTACTTCTGATGAAGTTCTTTTCACGGAAGCTGCTTCTAAGTCAACTGTTAATGATTTTGGCAATAGTAAGAAGCACTTTTACAGCGCGTTTGCGTTGGTGATGACAAAGCTTGGAGGACTGGTGTCAAGACTGATTGTTTGTAATTCATGTATTCATAAAGGTTTGGGAAATGTTACAAATTCCACGTCGACTAATGCAGGGATATTTGTCGCTAATTACATATTCCAAACATGA | 999 | 47.05 | MAKYWWRTLLFATILMYLGTGEGILVTNYYSSTCPNVEQIVRQAVQTKINQTFVTVPATLRLFFHDCFVDGCDASAMIASANGDAEKDAPENVSLAGDGFDTVIKAETAVESACPGIVSCAVVLAIAARDVNWARLDGLVSSASRVAGNLPGPSFNVTQLNALFAKNNLTQTDMIALSGAHTVGFAHCNRFANRLYNFSSSSSVDPSLDSNYAQQLMQACPQNVDPRIAIDMDPVTPRKFDNVYYQNLVDRKGLFTSDEVLFTEAASKSTVNDFGNSKKHFYSAFALVMTKLGGLVSRLIVCNSCIHKGLGNVTNSTSTNAGIFVANYIFQT | 332 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 226794 | 228085 | - | Conep02aG0004600.1 | Cone2ag0044 | 432511 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone2ag0044 | 332 | FunFam | Peroxidase | 151 | 292 | - | - | |
| Cone2ag0044 | 332 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 295 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | PANTHER | - | 14 | 294 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | PRINTS | Haem peroxidase superfamily signature | 118 | 135 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | PRINTS | Haem peroxidase superfamily signature | 233 | 248 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | PRINTS | Haem peroxidase superfamily signature | 173 | 188 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | PRINTS | Plant peroxidase signature | 98 | 111 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | PRINTS | Plant peroxidase signature | 247 | 264 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | PRINTS | Plant peroxidase signature | 231 | 246 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | PRINTS | Plant peroxidase signature | 117 | 127 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | CDD | secretory_peroxidase | 25 | 295 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
| Cone2ag0044 | 332 | Gene3D | - | 28 | 295 | - | - | |
| Cone2ag0044 | 332 | Gene3D | Peroxidase, domain 2 | 151 | 292 | - | - | |
| Cone2ag0044 | 332 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 321 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cone2ag0044 | 332 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 173 | 183 | IPR019793 | - | |
| Cone2ag0044 | 332 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601(InterPro) | |
| Cone2ag0044 | 332 | Pfam | Peroxidase | 41 | 276 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone16ag0994 | Cone-Chr16:9762029 | Cone2ag0044 | Cone-Chr2:226794 | 3.61E-170 | dispersed | |
| Cone16ag0995 | Cone-Chr16:9767612 | Cone2ag0044 | Cone-Chr2:226794 | 2.74E-93 | dispersed | |
| Cone2ag0044 | Cone-Chr2:226794 | Cone6ag1447 | Cone-Chr6:11576611 | 5.15E-110 | dispersed | |
| Cone2ag0043 | Cone-Chr2:222942 | Cone2ag0044 | Cone-Chr2:226794 | 3.02E-11 | tandem | |
| Cone11ag0046 | Cone-Chr11:222204 | Cone2ag0044 | Cone-Chr2:226794 | 4.10E-136 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone2ag0044 | K00430 | - | vvi:100249751 | 405.601 |