Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0062 ATGTGTACGGACAAGGGGAGAAACCTGCTCAAGGAGTTCAAGAAGGCTAGGCATGAAGCTAAAGGTGGGAATCGAGCTGCGAAGATGTCCTACTATGGCGAACTCGAAGAGTTGCTTAGAGATGTAGTACCTAATTTGCTTTTCCCAGGTCTGGATGATGCCACTACACCATTTGTATCTATAGAAGCTAATGACAGGTCAGCAGTCAACTTGGAAACTCAGTTGGACCATGATGGCGATCCTTTTGCCATTGCAGTTGCTGATACAGTTGTAGCCAATGGGGTGCCTCCTTGGGGCTGGAGAGAAACCCCTGGAAATGTTTTCTCTTTATGCAGCAGGAACGGAGGTTACAATAGAAGAATCGGAATCGATGGAACAGCTGATGCAATTAAAGAGGCAATCGAGTCTGCATTCAGGCTATGGACACGGGCATTCTGGTTGGAGGATGAAGATCAGGTTGTCAGGAGTTTTAATAGAGACATGCCTCTAGGCAACTATACACTTCAACTTGATGAGGGAGTGACGATAATTTGGCAATCAAGTGACTTTATGTTGATTCAAGTTATTAATGACAGATTTGGCATTGTTGAGGGTCTTATGACTACTGTCCATTCCATTACTGCCACACAAAAGACTGTTGATGGACCATCAATGAAAGACTGGAGAGGTGGTAGAGCTGCTTCCTTTAACATCATTCCCAGTAGTACTGGAGCTGCCAAGGCTGTTGGTAAAGTGCTGCCATCACTCAATGGAAAGTTGACCAGAATGTCATTCCGTGTCCCCACTGTTGATGTTTCAGTTGTTGACCTTACTGTGAGACTTGAAAAGAAGGCCACTTACGAGGACATCAAAGCTGTTATCAAAGAGTCTGATGGCAACCTGAAGGGAACCCTTGGTTACACTGAGGATGATGTGGCTGGTATAGCTTTGAACGACAACTTTGTGAAGCTCGTCACTTTGTTTGACAACGAATTGGGTTACAGGCGAAACTTCGATGCATAG 1002 45.01 MCTDKGRNLLKEFKKARHEAKGGNRAAKMSYYGELEELLRDVVPNLLFPGLDDATTPFVSIEANDRSAVNLETQLDHDGDPFAIAVADTVVANGVPPWGWRETPGNVFSLCSRNGGYNRRIGIDGTADAIKEAIESAFRLWTRAFWLEDEDQVVRSFNRDMPLGNYTLQLDEGVTIIWQSSDFMLIQVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTRMSFRVPTVDVSVVDLTVRLEKKATYEDIKAVIKESDGNLKGTLGYTEDDVAGIALNDNFVKLVTLFDNELGYRRNFDA 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 301526 304270 - Conep02aG0006500.1 Cone2ag0062 432529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0062 333 FunFam Glyceraldehyde-3-phosphate dehydrogenase 183 323 - -
Cone2ag0062 333 Gene3D Dihydrodipicolinate Reductase; domain 2 182 323 - -
Cone2ag0062 333 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 185 319 - -
Cone2ag0062 333 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 294 309 IPR020831 GO:0016620(InterPro)
Cone2ag0062 333 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 198 214 IPR020831 GO:0016620(InterPro)
Cone2ag0062 333 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 255 272 IPR020831 GO:0016620(InterPro)
Cone2ag0062 333 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 185 329 IPR020831 GO:0004365(PANTHER)|GO:0005829(PANTHER)|GO:0006096(PANTHER)|GO:0016620(InterPro)
Cone2ag0062 333 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 185 311 IPR020829 GO:0016620(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0015 Cone-Chr2:115378 Cone2ag0062 Cone-Chr2:301526 7.26E-30 dispersed
Cone16ag0970 Cone-Chr16:9673740 Cone2ag0062 Cone-Chr2:301526 2.81E-80 wgd
Cone2ag0062 Cone-Chr2:301526 Cone8ag0724 Cone-Chr8:7286476 3.94E-66 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0062 K00134 - csv:101214545 242.276