Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0110 ATGGAACCTTCATTCTACAAGCAACATCAAACCTCCTTCATTCTACCGGTCGACGGCGAAAACAAAGCTACAAAATTTAATCCTTTCTCTTTCTCGCCACCGCACATGGTGGCTTTCCACCTGGCATGGTTCTCGCTCTTCTCCAACTTCTTCTCCACCTTCTCTATCCCACCTCTCCTCCCCGTAATCCGCAGAGACCTCAAACTAACCGAATCCGACATTGGTGCAGCCGGCATAGCCGCCTTCACCGGCTCGATATTCTCCCGGCTTGCCATGGGCCCCGTTTGCGACCTCGTGGGCCCACGTATCGCCTCGGCCACTCTCTCCCTCCTCACTGCTCCTGTGATTCTCTCCACCTCTCTCATCTCAACCCCTCTATCTTTTATTCTTGTCCGGTTCTTCGTCGGTTTTTCGCTCGCAAATTTTGTGGCAAACCAGTTCTGGATGAGCTCCATGTTCTCTAGTAACGTAGTTGGCCGTGCTAATGGCGTCGCAGCTGGCTGGGCCAATGCAGGAGCTGGGGTGACTCAGCTAGTAATGCCATTGTTATACTCCTTCATTCTAAACAAGCTCAGCCTTCCGCCATTCATGGCCTGGCGAGTGGCATTTATCGTCCCTGCAATATTTCAAGCGACAATGGCAATACTGGTTTTAAAATATGGGCAAGATTTGCCTTCCGGAAAATACTCCAAGGAGGGAACCATTAAAGAAGAAAAAAAAACCTTGTTCACTGTTTTATTCAGAGGATTGAAGGACTATAGGGGGTGGATATTGGCCTTAGCATATGGATTCAGTTTTGGAGTGGAGCTCACAACTGATAATATCATAGCGGGGTATTTCTACGACAGGTTTGATTTGAACCTTGAGGTGGCAGGGACAGTGGCGTCAAGTTTTGGGGTGGCAAATTTGGTATCGAGGCCATTGGGAGGGGTGATTTCTGATGAGATGGGGAGGAGGTTCGGGATGAGAGGACGGTTATGGGGGTTGTGGGTGGTTCAAACCGTGGCTGGTTTGCTTTGTGTTTTGCTTGGAAGAGTTGGGTCCTTGTGGGGTTCTGTGCTGGTCATGTGTGGGTTCTCCTTCTTGCTTCAAGCGGCCAGTGGGCTCACTTTCGGCGTGGTACCTTTCGTTTCAAGAAGATCAATGGGAGTGATATCAGGGATGACAGGAAGTGGAGGAACAGTAGGGGCAGTGATAACACAGCTGTTACTTTTCTCAGGCTCTAGTAAATTTTCAAAGCAAGCAAGCATTTCTCTCATGGGTGTCATGATGCTCATCTTCACCCTCCCTCTTGCCTTAATTTACTTCCCTGAAGGGGGTGGTATGCTCTGTGGCCCTTCCTCCAATCCCAACAGTCAAGATTCTTATCACTTGCTACAATAA 1383 49.17 MEPSFYKQHQTSFILPVDGENKATKFNPFSFSPPHMVAFHLAWFSLFSNFFSTFSIPPLLPVIRRDLKLTESDIGAAGIAAFTGSIFSRLAMGPVCDLVGPRIASATLSLLTAPVILSTSLISTPLSFILVRFFVGFSLANFVANQFWMSSMFSSNVVGRANGVAAGWANAGAGVTQLVMPLLYSFILNKLSLPPFMAWRVAFIVPAIFQATMAILVLKYGQDLPSGKYSKEGTIKEEKKTLFTVLFRGLKDYRGWILALAYGFSFGVELTTDNIIAGYFYDRFDLNLEVAGTVASSFGVANLVSRPLGGVISDEMGRRFGMRGRLWGLWVVQTVAGLLCVLLGRVGSLWGSVLVMCGFSFLLQAASGLTFGVVPFVSRRSMGVISGMTGSGGTVGAVITQLLLFSGSSKFSKQASISLMGVMMLIFTLPLALIYFPEGGGMLCGPSSNPNSQDSYHLLQ 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 538474 540735 - Conep02aG0011400.1 Cone2ag0110 432577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0110 460 ProSiteProfiles Major facilitator superfamily (MFS) profile. 38 433 IPR020846 GO:0022857(InterPro)
Cone2ag0110 460 Gene3D MFS general substrate transporter like domains 238 440 IPR036259 -
Cone2ag0110 460 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 8 453 IPR044772 GO:0005886(PANTHER)|GO:0015112(PANTHER)|GO:0015112(InterPro)|GO:0015706(PANTHER)|GO:0071249(PANTHER)
Cone2ag0110 460 Gene3D MFS general substrate transporter like domains 34 230 IPR036259 -
Cone2ag0110 460 FunFam High affinity nitrate transporter 2.5 31 228 - -
Cone2ag0110 460 FunFam Nitrate transporter 2.1 239 441 - -
Cone2ag0110 460 Pfam Major Facilitator Superfamily 43 396 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cone2ag0110 460 SUPERFAMILY MFS general substrate transporter 27 435 IPR036259 -
Cone2ag0110 460 CDD MFS_NRT2_like 39 433 IPR044772 GO:0015112(InterPro)
Cone2ag0110 460 ProSitePatterns Sugar transport proteins signature 1. 309 324 IPR005829 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0110 Cone-Chr2:538474 Cone5ag1250 Cone-Chr5:5884497 1.87E-155 dispersed
Cone2ag0110 Cone-Chr2:538474 Cone8ag0681 Cone-Chr8:6818916 2.35E-183 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0110 K02575 - cit:102627329 615.535