Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0112 ATGAATTCCACATTTTTTTTCTTCTTCTTCTTCATCACATTAGTTTCTATCTCTAGCGCCGATCCTCGAACCTCCACGTCCGGTCTCTTCTGCAATGGTTCCCAATCTTCACCTACTACCCCCTTCATTCCCACCTTCGTCAAAGAAATGGAATCCTTATCCAAACAAATCGCCACCCGAAAATGGGCAACGCATTTCATCAACTCGACCGGGCCAATGTACGGCCTAGCGCAATGCTTCCAAGACCTCTCTCAGACCGACTGCCTTCTCTGCTACGCCGCGAGTCGAACTGCTCTCCCCCGCTGCCTTCCCTCCATTTCCGCTAGAATCTACCTCGACGGATGCTTCCTCCGCTACGACAATTACAGTTTCTATTCAGAATCTGTAGATTTCTCGAAAGATTCTCTCAATTGCAGCTCGAATTTAGGCCAGATCGACGATGAGATGGACAAATCAAAGTTCGTGGCTAGTTTAAGGCGTGTAGTTGATAATGTGACGAGGATTGCGGTGAGAGATGGAGGATTTGGAGCTGGAGAAGTTAATGGAGTATTTGCATTAGCTCAGTGCTGGCAACCGGTAGGGATCGAAGGATGTCGAGTTTGTTTGGAGAAGGCGAGCGAGAAGGTGAGAGAATGTAGTCCGAGAAAAGAAGGGAGAGTTTTGAATGTCGGATGCTATTTGAGGTATTCTACTGTCAAGTTCTATAATGATAAGGAAGAAGATGAGCATCATCAAGGAAACACTGCAAGAAGATTCATAGTGGCCATCATTTTGGCTTCAGCTGCATTCTTAATGCTGTCTTTCCTTGCCATTTATGCTGCTTGCACAAAATTATCAGATATGAGAAAAGAGAACAGTAATCACCGGTTGGTTTCAATCTCCATGAGAAAATCCGGTGTGGATTTTAAGTATGAAACACTGGAAAAGGCGACTGATTACTTCAGCCGTTCGAGAAAAATAGGCGAAGGTGGAGCCGGAACTGTATTTAAAGGTACTCTTTCAAATGGGAAAACCGTAGCCGTGAAGAGATTGATTTTCAACACGAGGCAATGGGTCGATGAATTCTTCAACGAGGTGAATTTGATAAGCGGAATTCAACACCGGAATCTCGTGAAACTTCTCGGTTGCAGCATCGAAGGCCCGGAAAGCCTGCTTGTTTATGAATATGTTCCTAATAGAAGCCTTGATCAATTCATATTTGGTAAGGACAGGGTTCGGATTCTAAACTGGAAACAACGGCTTAATATAATTATAGGCACAGCTGAGGGCCTTGCATACCTTCATGAAGGTTGCAAAGTAAAGATTATCCATAGAGATATTAAAAGCAGCAATATTCTTCTTGATGAGAATATGACTCCCAAAATTGCCGACTTTGGCCTTGCTCGGTGTTTAGCCGCTGATGATACTCATATAACCACTGGACTTGCCGGAACATTAGGTTATATGGCTCCCGAATATCTTATTCGCGGACAACTCACCGAGAAAGCCGATGTTTATAGTTTTGGAGTTTTGGTTCTCGAGATTGTAAGTGGTCGGAGAAATAATGCCTTCGTAGAGGAGTCGAACTCTCTTCTTCAAACAGTATGGAAGCATTACAAATCCAATAAGTTGATTGAAGCTATTGATCCGGCCTTAAGAGACAATTTTCCGGGGAAAGAAGAAGCATCATACATACTCCAAATCGGACTTTTATGCACACAAGCCGTAGCTAGTTCAAGGCCATCGATGATTCAAGTGGTTCAAATGCTAAATGACAGAGAAAATCCGATTTCTGTACCGAGCCAGCCTCCGTTTCTAAATGCTAATGCGATTGAGCCGGAAAGCTGTGAAAGATCTTATGGGATTAACAGCTTGGTATTGAATACACTGCAGAAGCTTCAAGCTCCATACACCTCTTCACAATTCTCTAGTATGGAGGGTTTGGAATCTAGGTAG 1935 43.62 MNSTFFFFFFFITLVSISSADPRTSTSGLFCNGSQSSPTTPFIPTFVKEMESLSKQIATRKWATHFINSTGPMYGLAQCFQDLSQTDCLLCYAASRTALPRCLPSISARIYLDGCFLRYDNYSFYSESVDFSKDSLNCSSNLGQIDDEMDKSKFVASLRRVVDNVTRIAVRDGGFGAGEVNGVFALAQCWQPVGIEGCRVCLEKASEKVRECSPRKEGRVLNVGCYLRYSTVKFYNDKEEDEHHQGNTARRFIVAIILASAAFLMLSFLAIYAACTKLSDMRKENSNHRLVSISMRKSGVDFKYETLEKATDYFSRSRKIGEGGAGTVFKGTLSNGKTVAVKRLIFNTRQWVDEFFNEVNLISGIQHRNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFGKDRVRILNWKQRLNIIIGTAEGLAYLHEGCKVKIIHRDIKSSNILLDENMTPKIADFGLARCLAADDTHITTGLAGTLGYMAPEYLIRGQLTEKADVYSFGVLVLEIVSGRRNNAFVEESNSLLQTVWKHYKSNKLIEAIDPALRDNFPGKEEASYILQIGLLCTQAVASSRPSMIQVVQMLNDRENPISVPSQPPFLNANAIEPESCERSYGINSLVLNTLQKLQAPYTSSQFSSMEGLESR 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 550324 553184 - Conep02aG0011600.1 Cone2ag0112 432579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0112 644 FunFam Cysteine-rich receptor-like protein kinase 3 138 234 - -
Cone2ag0112 644 ProSiteProfiles Gnk2-homologous domain profile. 133 234 IPR002902 -
Cone2ag0112 644 FunFam Cysteine-rich receptor-like protein kinase 2 390 591 - -
Cone2ag0112 644 FunFam Cysteine-rich receptor-like protein kinase 42 50 124 - -
Cone2ag0112 644 SMART serkin_6 314 583 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0112 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0112 644 CDD STKc_IRAK 320 584 - -
Cone2ag0112 644 FunFam Cysteine-rich receptor-like protein kinase 2 281 389 - -
Cone2ag0112 644 SUPERFAMILY Protein kinase-like (PK-like) 290 583 IPR011009 -
Cone2ag0112 644 Gene3D - 137 234 IPR038408 -
Cone2ag0112 644 Gene3D - 25 124 IPR038408 -
Cone2ag0112 644 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 165 602 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cone2ag0112 644 Gene3D Phosphorylase Kinase; domain 1 274 389 - -
Cone2ag0112 644 Gene3D Transferase(Phosphotransferase) domain 1 390 592 - -
Cone2ag0112 644 Pfam Salt stress response/antifungal 31 122 IPR002902 -
Cone2ag0112 644 Pfam Salt stress response/antifungal 148 231 IPR002902 -
Cone2ag0112 644 ProSiteProfiles Gnk2-homologous domain profile. 24 124 IPR002902 -
Cone2ag0112 644 ProSiteProfiles Protein kinase domain profile. 314 564 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0112 644 Pfam Protein tyrosine and serine/threonine kinase 317 583 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0658 Cone-Chr12:6028821 Cone2ag0112 Cone-Chr2:550324 8.96E-162 dispersed
Cone13ag0150 Cone-Chr13:946347 Cone2ag0112 Cone-Chr2:550324 1.11E-205 dispersed
Cone2ag0112 Cone-Chr2:550324 Cone8ag0680 Cone-Chr8:6804886 3.61E-169 dispersed
Cone5ag0979 Cone-Chr5:4192369 Cone2ag0112 Cone-Chr2:550324 5.24E-118 transposed
Cone11ag0105 Cone-Chr11:455161 Cone2ag0112 Cone-Chr2:550324 2.05E-124 wgd
Cone16ag0935 Cone-Chr16:9517690 Cone2ag0112 Cone-Chr2:550324 0 wgd
Cone2ag0112 Cone-Chr2:550324 Cone8ag0679 Cone-Chr8:6769285 2.59E-157 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82588 PF06203 CCT 4.00E-17 CL0281 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0112 - - - 0.0