Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0122 ATGGCTGAAAGGAGAAGGAAAGGGATACATTTTAGCAAACTGTATTCATTTTTGTGTCGGCACTCGACGTTTAAGGATCATCATGATCAAATTGGACAAACAGGTTACTCGAGGGTTGTTTATTGTAATGAACCCGAAAAGCCGGAAGCAATCGAGTTGAATTACAGGGGAAACAATGTGTCGACTACTAAGTATACGGCCGCTAATTTTATCCCAAAGTCTTTGTTCGAACAGTTTAAGAGAGTTGCAAATATATACTTTCTTGTTGTAGCTTTTGTCTCCTTTAGTCCTTTGGCTCCATTTACGGCTCCCAGTGTTCTTGCCCCGCTGATAATACCGTCTCCAGGAGAGCATTTTAGTCATTGCATAAGAGACGGGAAGGACGTAGAGGCGAACAACCGAAAGGTTAAAGTGTATGTTAAGGACGACAACAAATTCCAAGAGACGAGATGGAAGAACCTCCGAGTCGGTGACATTGTAAAAGTACATAAAGACGATTACTTCCCAGCTGATCTTCTCCTTCTTTCTTCAAGCTACGAAGACGGGGTTTGTTATGTGGAGACCATGAATCTAGACGGAGAAACTAACTTAAAATTGAAGCATGCTTTGGAAATCACATCTCATCTCCGCGATGAAGTGTCCTTCAAAAATTTCAAAGCAGTGATCAAGTGTGAGGACCCTAATGAGAATCTCTACACATTCATCGGAACATTATATTATAATGAAAGTCCGTACCCTCTCTCGCCGCAACAGATTCTTTTACGTGGTTCTAAGCTTAAAAATACAGAGTATGTCTTTGGAGTTGTTATCTTCACGGGACATGATACCAAGGTGATGAAGAATGCAACTGATCCTCCTTCCAAGAGGAGTAAAATCGAACGGAAAATGGATAAGATAGGTGGAAAGCTTAGAAGGTGGTATCTCCGTCCAGATCGTACATCTGTCTTCTACGACCCAAAACAGGCCCCACTTGCGGCTTTTTTCCATTTCCTGACCGCCCTTATGTTGTACGGATACTTAATTTCGATTTCATTATATGTATCAATTGAGATTGTGAAGGTCTTACAAAGCATTTTCATTAACCAAGATATTGACCTGTATTGTGAGGAAATGGATAAACCAACTCATGCTAGGACTTCTAATCTGAATGAGGAACTCGGACAAGTAGATACGATACTTTCTGACAAAACGGGCACTTTGACTTGTAACTCCATGGACTTTGTGAAATGCTCTATAGCAGGGTCCGCTTATGGTCGTAGGTTGACTGATGTCTAG 1275 41.25 MAERRRKGIHFSKLYSFLCRHSTFKDHHDQIGQTGYSRVVYCNEPEKPEAIELNYRGNNVSTTKYTAANFIPKSLFEQFKRVANIYFLVVAFVSFSPLAPFTAPSVLAPLIIPSPGEHFSHCIRDGKDVEANNRKVKVYVKDDNKFQETRWKNLRVGDIVKVHKDDYFPADLLLLSSSYEDGVCYVETMNLDGETNLKLKHALEITSHLRDEVSFKNFKAVIKCEDPNENLYTFIGTLYYNESPYPLSPQQILLRGSKLKNTEYVFGVVIFTGHDTKVMKNATDPPSKRSKIERKMDKIGGKLRRWYLRPDRTSVFYDPKQAPLAAFFHFLTALMLYGYLISISLYVSIEIVKVLQSIFINQDIDLYCEEMDKPTHARTSNLNEELGQVDTILSDKTGTLTCNSMDFVKCSIAGSAYGRRLTDV 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 589528 591465 + Conep02aG0012700.1 Cone2ag0122 432589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0122 424 ProSitePatterns E1-E2 ATPases phosphorylation site. 395 401 IPR018303 -
Cone2ag0122 424 FunFam Phospholipid-transporting ATPase 116 283 - -
Cone2ag0122 424 Pfam Phospholipid-translocating ATPase N-terminal 40 102 IPR032631 -
Cone2ag0122 424 SUPERFAMILY Calcium ATPase, transduction domain A 137 282 IPR008250 -
Cone2ag0122 424 Gene3D - 119 284 - -
Cone2ag0122 424 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 26 422 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone2ag0122 424 Pfam E1-E2 ATPase 134 302 - -
Cone2ag0122 424 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 387 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0122 Cone-Chr2:589528 Cone2ag0126 Cone-Chr2:609080 8.12E-245 dispersed
Cone2ag0122 Cone-Chr2:589528 Cone2ag0124 Cone-Chr2:599386 2.02E-121 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0122 K01530 - mdm:103404324 659.833