Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0123 ATGGAGGGGAATTGGGTTAATGAGCTTCATTCAGATTTTATTCAGAAATTTTTCCGGGTGCTAGCTTTATGTCATACAGCTGTTCCGGTTGTAAATGAAGAGATAGGAGAGATTTCTTATGAGGCGGAGTCACCTGATGAAGCGGCTTTTGTTATAGCTGCAAGGGAGCTCGGGTTCGAGTTTTTCGAACGGACTCAAACGAGCATTTCTTTGCGGGAGTTAGATTTTGCAAACGGGAAAAAGGTTGAAAGAGTGTACGAGCTTCTTCAGGTCTTAGAGTTCAGTAGTTCTCGGAAAAGAAGGTCAGTCATTGTAAGAAATCCGGAAAATCAACTATTGCTCCTCTCTAAAGGTGCAGATAGTGTAATGTTTGAGAGGTTATCAAAAGACGGTAGGATGTTTGAGACGGAGACAAAAGAGCAGATCAAAGAATATTCCGAAGCAGGGCTTAGAACCTTGGTAGTTACATGCCGCGAGCTGGATGAAGTAGAGTACAAGAAATGGGAAGACAAGTTCTTAAAGGCCAAAACTGCCGTCACAGCAGACCGAGATGTGTTAATGGACACAATTGCAGATGATATCGAAAGAAACTTAATCCTTCTCGGTGCTACTGCTGTTGAAGACAAACTCCAGAAGGGGGTGCCGGAATGCATTGACAAGCTTGCTCAAGCCGGAATCAAGATATGGGTATTGACCGGGGATAAGATGGAAACTGCTGTTAATATCGGGTATGCTTGTAGCTTACTTAGAAAAGATATGAAACAAATAGTGATCACACTTGATTCTCGGGAAATTGATATTTTGGAAAAACATGGCGAAAAGGCAGCTATTGAGAAGGCATTTCTTGAGAGTGTGAGAAAGCAAATTAGAGAAGGAATGTCTCAAATCACTGACAGCAAAAAAAGTGAAGAAAAGTCTTCTTTCAGCTTAGTAGTTGACGGAAAGTCATTGGATTTTGCTCTCAAATCTGTGGAGAAGTCATTTTTTGAGATTGCAGCCAGTTGTACTTCTGTCATATGCTGTCGTTCTTCGCCTAAACAAAAAGCCCTTGTTACGAGAATGGTCAAACAACGAACGGGTAAAACAACATTATCAGTAGGTGATGGAGCAAATGATGTCGGAATGCTTCATGAGGCTGACATTGGAGTTGGCATTAGTGGTGTTGAAGGGATGCAGGAGTTGGCATTATGTTGTTTTTTCCTTACGAACTTTTTTATTCTTTCCATGCGACCCCACCCACCCGATTTTCACCGAAACTGTAAATGCAATCGAATCGGATTTTCACCGATTTGGTTGAAGAAGCCGACCATAACCGAACCGATACTACTTTACTCTACGGGTCGTAAGCCTCCTCAATTCGTAGAATATCATAAGTTATAA 1380 41.74 MEGNWVNELHSDFIQKFFRVLALCHTAVPVVNEEIGEISYEAESPDEAAFVIAARELGFEFFERTQTSISLRELDFANGKKVERVYELLQVLEFSSSRKRRSVIVRNPENQLLLLSKGADSVMFERLSKDGRMFETETKEQIKEYSEAGLRTLVVTCRELDEVEYKKWEDKFLKAKTAVTADRDVLMDTIADDIERNLILLGATAVEDKLQKGVPECIDKLAQAGIKIWVLTGDKMETAVNIGYACSLLRKDMKQIVITLDSREIDILEKHGEKAAIEKAFLESVRKQIREGMSQITDSKKSEEKSSFSLVVDGKSLDFALKSVEKSFFEIAASCTSVICCRSSPKQKALVTRMVKQRTGKTTLSVGDGANDVGMLHEADIGVGISGVEGMQELALCCFFLTNFFILSMRPHPPDFHRNCKCNRIGFSPIWLKKPTITEPILLYSTGRKPPQFVEYHKL 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 591571 593839 + Conep02aG0012800.1 Cone2ag0123 432590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0123 459 Pfam Cation transport ATPase (P-type) 22 128 - -
Cone2ag0123 459 FunFam Phospholipid-transporting ATPase 201 405 - -
Cone2ag0123 459 Pfam haloacid dehalogenase-like hydrolase 242 384 - -
Cone2ag0123 459 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 10 404 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone2ag0123 459 NCBIfam phospholipid-translocating P-type ATPase 4 404 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone2ag0123 459 Gene3D - 41 201 IPR023299 GO:0000166(InterPro)
Cone2ag0123 459 Gene3D - 202 403 IPR023214 -
Cone2ag0123 459 FunFam Phospholipid-transporting ATPase 43 201 - -
Cone2ag0123 459 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 2 203 IPR023299 GO:0000166(InterPro)
Cone2ag0123 459 SUPERFAMILY HAD-like 195 387 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0123 Cone-Chr2:591571 Cone2ag0127 Cone-Chr2:611123 3.97E-267 dispersed
Cone2ag0121 Cone-Chr2:582558 Cone2ag0123 Cone-Chr2:591571 1.44E-103 proximal
Cone2ag0123 Cone-Chr2:591571 Cone2ag0125 Cone-Chr2:600969 4.68e-311 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0123 K01530 - gmx:100779714 572.007