Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0125 ATGTTGTACGGATACTTAATTTCGATTTCATTATATGTATCAATTGAGATTGTGAAGGTCTTACAAAGCATTTTCATTAACCAAGATATTGACATGTATTGTGAGGAAATGGATAAACCAACTCATGCTAGGACTTCTAATCTGAATGAGGAACTCGGACAAGTAGATACGATACTTTCTGACAAAACGGGCACTTTGACTTGTAACTCCATGGACTTTGTGAAATGCTCTATAGCAGGGTCCGCTTATGGTCGTAGGTTGACTGATGTCGAGATTGCACTTGCAAGGAAAAATCTGGACCATCCATTCGAAATTAATGATGTTAAAGAGGACGGGAAGAAGTCAATTAAGGGGTTCAATTTTAGAGACGAACGGATTATGGAGGGGAATTGGGTTAATGAGCTTCATTCAGATTTTATTCAGAAATTTTTCCGGGTGCTAGCTTTATGTCATACAGCTGTTCCGGTTGTAAATGAAGAGATAGGAGAGATTTCTTATGAGGCGGAGTCACCTGATGAAGCGGCTTTTGTTATAGCTGCAAGGGAGCTCGGGTTCGAGTTTTTCGAACGGACTCAAACGAGCATTTCTTTGCGGGAGTTAGATTTTGCAAACGGGAAAAAGGTTGAAAGAGTGTACGAGCTTCTTCAGGTCTTAGAGTTCAGTAGTTCTCGGAAAAGAAGGTCAGTCATTGTAAGAAATCCGGAAAATCAACTATTGCTCCTCTCTAAAGGTGCAGATAGTGTAATGTTTGAGAGGTTATCAAAAGACGGTAGGATGTTTGAGACGGAGACAAAAGAGCAGATCAAAGAATATTCCGAAGCAGGGCTTAGAACCTTGGTAGTTACATGCCGCGAGCTGGATGAAGTAGAGTACAAGAAATGGGAAGACAAGTTCTTAAAGGCCAAAACTGCCGTCACAGCAGACCGAGATGTGTTAATGGACACAATTGCAGATGATATCGAAAGAAACTTAATCCTTCTCGGTGCTACTGCTGTTGAAGACAAACTCCAGAAGGGGGTGCCGGAATGCATTGACAAGCTTGCTCAAGCCGGAATCAAGATATGGGTATTGACCGGGGATAAGATGGAAACTGCTGTTAATATCGGGTATGCTTGTAGCTTACTTAGAAAAGATATGAAACAAATAGTGATCACACTTGATTCTCGGGAAATTGATATTTTGGAAAAACATGGCGAAAAGGCAGCTATTGAGAAGGCATTTCTTGAGAGTGTGAGAAAGCAAATTAGAGAAGGAATGTCTCAAATCACTGACAGCAAAAAAAGTGAAGAAAAGTCTTCTTTCAGCTTAGTAGTTGACGGAAAGTCATTGGATTTTGCTCTCAAATCTGTGGAGAAGTCATTTTTTGAGATTGCAGCCAGTTGTACTTCTGTCATATGCTGTCGTTCTTCGCCTAAACAAAAAGCCCTTGTTACGAGAATGGTCAAACAACGAACGGGTAAAACAACATTATCAGTAGGTGATGGAGCAAATGATGTCGGAATGCTTCATGAGGCTGACATTGGAGTTGGCATTAGTGGTGTTGAAGGGATGCAGGAGTTGGCATTATGTTGTTTTTTCCTTACGAACTTTTTTATTCTTTCCATGCGACCCCACCCACCCGATTTTCACCGAAACTGTAAATGCAATCGAATCGGATTTTCACCGATTTGGTTGAAGAAGCCGACCATAACCGAACCGTTTACTCGAATGGTCGATACAGTTTTCGACCATTCGACCCGTACAAAAAGTAAATAA 1755 41.03 MLYGYLISISLYVSIEIVKVLQSIFINQDIDMYCEEMDKPTHARTSNLNEELGQVDTILSDKTGTLTCNSMDFVKCSIAGSAYGRRLTDVEIALARKNLDHPFEINDVKEDGKKSIKGFNFRDERIMEGNWVNELHSDFIQKFFRVLALCHTAVPVVNEEIGEISYEAESPDEAAFVIAARELGFEFFERTQTSISLRELDFANGKKVERVYELLQVLEFSSSRKRRSVIVRNPENQLLLLSKGADSVMFERLSKDGRMFETETKEQIKEYSEAGLRTLVVTCRELDEVEYKKWEDKFLKAKTAVTADRDVLMDTIADDIERNLILLGATAVEDKLQKGVPECIDKLAQAGIKIWVLTGDKMETAVNIGYACSLLRKDMKQIVITLDSREIDILEKHGEKAAIEKAFLESVRKQIREGMSQITDSKKSEEKSSFSLVVDGKSLDFALKSVEKSFFEIAASCTSVICCRSSPKQKALVTRMVKQRTGKTTLSVGDGANDVGMLHEADIGVGISGVEGMQELALCCFFLTNFFILSMRPHPPDFHRNCKCNRIGFSPIWLKKPTITEPFTRMVDTVFDHSTRTKSK 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 600969 603693 + Conep02aG0013000.1 Cone2ag0125 432592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0125 584 FunFam Phospholipid-transporting ATPase 169 327 - -
Cone2ag0125 584 SFLD Haloacid Dehalogenase 42 524 - -
Cone2ag0125 584 Pfam haloacid dehalogenase-like hydrolase 368 510 - -
Cone2ag0125 584 FunFam Phospholipid-transporting ATPase 327 531 - -
Cone2ag0125 584 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 530 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone2ag0125 584 SUPERFAMILY HAD-like 47 523 IPR036412 -
Cone2ag0125 584 Gene3D - 323 529 IPR023214 -
Cone2ag0125 584 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 126 329 IPR023299 GO:0000166(InterPro)
Cone2ag0125 584 Gene3D - 167 300 IPR023299 GO:0000166(InterPro)
Cone2ag0125 584 NCBIfam phospholipid-translocating P-type ATPase 1 530 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone2ag0125 584 PRINTS P-type cation-transporting ATPase superfamily signature 492 511 - -
Cone2ag0125 584 PRINTS P-type cation-transporting ATPase superfamily signature 59 73 - -
Cone2ag0125 584 SFLD p-type atpase 42 524 IPR044492 -
Cone2ag0125 584 Pfam Cation transport ATPase (P-type) 148 254 - -
Cone2ag0125 584 ProSitePatterns E1-E2 ATPases phosphorylation site. 61 67 IPR018303 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0121 Cone-Chr2:582558 Cone2ag0125 Cone-Chr2:600969 4.76E-102 dispersed
Cone2ag0125 Cone-Chr2:600969 Cone6ag0484 Cone-Chr6:2412016 5.24E-225 dispersed
Cone2ag0123 Cone-Chr2:591571 Cone2ag0125 Cone-Chr2:600969 4.68e-311 proximal
Cone2ag0125 Cone-Chr2:600969 Cone2ag0127 Cone-Chr2:611123 4.95E-265 proximal
Cone2ag0125 Cone-Chr2:600969 Cone2ag0126 Cone-Chr2:609080 1.85E-38 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0125 K01530 - vvi:100259356 758.829