Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0133 ATGTCTGATTCTTCCGAAACTCTAAGGAACAAGTGTGCAGCATGCTTCAGGCAATTCAACAGGATGGAACACTTAGTGGATCATATGAGAACCTCATTTCACTCGAATCATGAACCCACTTGTGGGATTTGCAGGAAGCATTGCAGATCTTTTGAGTCCCTTAGAGAACATCTTATTGGGCCATTACCAAAAGCTGAATGCAAAGAGATATTCAGCATGAGAGGGTGCAAGTTCTGCTTAGCCATCTTTGATAGCCCTTATTCTGTTAGGGTTCATCAACAAAGAGCATGCCAAGTTTCTGCTGGACTCAATCCCGGACTAGTCGGCCGCCCCGCAAACTTAGTGGTTCGAGACAACTTCAGTATAGACACTGGAAGAACAAGATCAGGGCCAGAGGTGGTTGCATTAGCTTGCAAAATGGTGGGTGGAGGCAACGATGGCTCTTTAGATGTCTGTGCAAGAGTTTGCATCATTGACGAAAACGAAAACATCATCTTCCACACTTATGTTATGCCAACCATCCCTGTCACTAACTATAGGTATGAGTCGACCGGAATCCGACCGGAATTCCTAAGAGATGCAATGCCAATGAGGCAAGTGCAAAAGAAGGTTCAAGACTTTCTGTGTAATGGTCAACCTTTGTGGCAGATTCGACCTAGAGGTGGGAGAGCAAGGATTCTTGTGGGCCATGGTTTAGATCACGACCTTGATCGCTTGCAAATTGAATATCCATCTATAATGTTCAGGGATACTGCAAAATATCCTCCATTGATGAAAACAAGCAAGCTCTGCAACTCACTCAAGTATTTGTCACAAGTATATCTTGGGTTTGAGATTCAAAATGGGATACAAGACCCATATGAGGATTGTGTGGCAAGCATGAAGCTGTACATGAGAATGAGATCACAAGGTCATAGGATAGAGGACTGCCCAATGGCTTCTGACCCACAAAACAAGAACAACTTTGCAACATGGAGGCAAAGTGAGCTTGAGAGAATGACACCAGAACAGATGTTGGAGATTTCTAGGTCTGATTACTACTGTTGGTGCTTGGATAATTAA 1062 43.79 MSDSSETLRNKCAACFRQFNRMEHLVDHMRTSFHSNHEPTCGICRKHCRSFESLREHLIGPLPKAECKEIFSMRGCKFCLAIFDSPYSVRVHQQRACQVSAGLNPGLVGRPANLVVRDNFSIDTGRTRSGPEVVALACKMVGGGNDGSLDVCARVCIIDENENIIFHTYVMPTIPVTNYRYESTGIRPEFLRDAMPMRQVQKKVQDFLCNGQPLWQIRPRGGRARILVGHGLDHDLDRLQIEYPSIMFRDTAKYPPLMKTSKLCNSLKYLSQVYLGFEIQNGIQDPYEDCVASMKLYMRMRSQGHRIEDCPMASDPQNKNNFATWRQSELERMTPEQMLEISRSDYYCWCLDN 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 698572 700360 + Conep02aG0013800.1 Cone2ag0133 432600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0133 353 CDD REX4_like 134 297 IPR037431 GO:0006364(InterPro)|GO:0008408(InterPro)
Cone2ag0133 353 Pfam Exonuclease 151 296 IPR013520 -
Cone2ag0133 353 FunFam RNA exonuclease 4 129 316 - -
Cone2ag0133 353 ProSitePatterns Zinc finger C2H2 type domain signature. 12 34 IPR013087 -
Cone2ag0133 353 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 4 353 IPR047021 GO:0004527(InterPro)|GO:0004527(PANTHER)|GO:0005634(PANTHER)
Cone2ag0133 353 Gene3D - 130 314 IPR036397 GO:0003676(InterPro)
Cone2ag0133 353 SMART exoiiiendus 132 306 IPR013520 -
Cone2ag0133 353 SUPERFAMILY Ribonuclease H-like 145 301 IPR012337 -
Cone2ag0133 353 ProSiteProfiles Zinc finger C2H2 type domain profile. 10 39 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0922 Cone-Chr16:9456870 Cone2ag0133 Cone-Chr2:698572 8.20E-238 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0133 - - - 0.0