Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0152 ATGGCGGCAATCCTTCGTTTCTTCCTCATCTTATCTCTCACACTACTCTCCCCCTCACATTCCACCGCCGCCGCCGGAGCTCTCAGCCTGAACTACTACCAAACATCTTGTCCAAGATTCACTCAAATTATCCAAGACACTATCACAAACAAACAGATCACGACTCCCACCACCGCCGCGGCCACACTCCGCCTCTTCTTCCATGACTGCCTCCTGAACGGCTGCGATGCCTCCGTTCTCATCTCCTCTGCTCCCTTCAACAAAGCCGAGCGGGATGCCGACATCAACCTATCACTCCCCGGCGACTCCTTCGACGTCGTCGTCCGCGCCAAAACCGCCCTCGAACTCGCCTGCCCCAACACTGTCTCATGCGCGGACATCCTCACCGTTGCCACCCGCGATCTCGTCACGATGGTCGGCGGGCCGTACTACGACGTCTTACTGGGCCGCAAAGACGGGCTGGAGTCAAAAGCCGCCACCGTGGCCGGCCACCTTCCTCAGCCCACCATGTCCATAACACAAATCATCAAAATCTTCAGCTCGAGAGGATTCACCATCCAAGAGATGGTCGCGTTGAGTGGGGCCCACACCATCGGGTTTTCCCACTGCAAGGAGTTCAGCGCAGGGATCTACAATTACAGTAAGTCCTCACAGTCCGATCCTCAATACAACCCCAGATATGCGCAAGGATTGCAGAATGCATGTCGAGATTTTCTAAAAAATCCGACCTTGTCTGTGTTCAACGACTTGATGACGCCGAACAAGTTCGATAATATTTACTTCCAGAACCTCCCGAAGGGGTTGGGATTACTGAAATCGGATCATGGATTGTATAGTGATGCGAGGACGAAGAGGTTTGTGGAGGATTACGCGGCGGATCAGGACAAGTTCTTTCAGGCATTTCGTCGAGCAATTGAGAAGCTTAGTGTTTATGGCGTCAAGACGGGGAGTCAAGGTCAGATCAGGCGCAGGTGTGACGCTTTCAATTGA 990 53.43 MAAILRFFLILSLTLLSPSHSTAAAGALSLNYYQTSCPRFTQIIQDTITNKQITTPTTAAATLRLFFHDCLLNGCDASVLISSAPFNKAERDADINLSLPGDSFDVVVRAKTALELACPNTVSCADILTVATRDLVTMVGGPYYDVLLGRKDGLESKAATVAGHLPQPTMSITQIIKIFSSRGFTIQEMVALSGAHTIGFSHCKEFSAGIYNYSKSSQSDPQYNPRYAQGLQNACRDFLKNPTLSVFNDLMTPNKFDNIYFQNLPKGLGLLKSDHGLYSDARTKRFVEDYAADQDKFFQAFRRAIEKLSVYGVKTGSQGQIRRRCDAFN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 793258 794447 + Conep02aG0015700.1 Cone2ag0152 432619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0152 329 FunFam Peroxidase 166 308 - -
Cone2ag0152 329 FunFam Peroxidase 31 175 - -
Cone2ag0152 329 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 Gene3D - 31 329 - -
Cone2ag0152 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cone2ag0152 329 Pfam Peroxidase 47 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 Gene3D Peroxidase, domain 2 166 308 - -
Cone2ag0152 329 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Cone2ag0152 329 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 CDD secretory_peroxidase 28 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone2ag0152 329 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone2ag0152 329 PANTHER - 14 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag1350 Cone-Chr18:9296925 Cone2ag0152 Cone-Chr2:793258 2.87E-60 dispersed
Cone2ag0152 Cone-Chr2:793258 Cone8ag0155 Cone-Chr8:800105 7.79E-95 dispersed
Cone16ag0126 Cone-Chr16:712587 Cone2ag0152 Cone-Chr2:793258 1.03E-130 wgd
Cone16ag0901 Cone-Chr16:9346509 Cone2ag0152 Cone-Chr2:793258 2.85E-215 wgd
Cone18ag1349 Cone-Chr18:9296612 Cone2ag0152 Cone-Chr2:793258 6.29E-30 wgd
Cone19ag0123 Cone-Chr19:688592 Cone2ag0152 Cone-Chr2:793258 9.25E-132 wgd
Cone2ag0152 Cone-Chr2:793258 Cone2ag0883 Cone-Chr2:34735984 1.33E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0152 K00430 - mdm:103442292 477.248