Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0168 ATGGAAAACCCACCACCACCACCATCGCCGCTGCAAGACATGGCGGCGCAAAATAATGACATGGTTGAGAAATCCTTCAAGCAAAGTGTGAGCATAATGAGCACCATTTCCGGCCCAAGTGTCAGTGTAAGCAGCATGAGCAGCAAAAACGACGACGGATCTCATGCAGGACAACTACTGGATGTTAGTAGTGAGAAGAGGAGTAGCAGCACTAGTGACGACGATCTAGACTCGAATGAGACGATTTCTAGAACCTCTTTTAGGCATTCTAAACCTCATAAGGGGAATGATATGAGATGGGAATTGATCCAGAAACTGAAAAGGAAAGATGGTAATATAAGATTAGCCCATTTCAGGCTGTTGAAGAAGCTGGGATGTGGTGATATAGGAAGTGTTTATCTGGCTGAGTTAAGAGGGACGGCCTGTTTGTTTGCCATGAAAGTTATGGATAAAGGAATGTTAGTTGGCAGGAAGAAATTGTTGAGAGCTCAAACGGAGAGAGACATTCTTGGTCTGTTAGATCATCCTTTTCTTCCTACCCTCTACTCCCATTTTGAAACCGATAAGTTCTCTTGCTTGTTAATGGATTTTTGCAATGGCGGCGACCTCCACACTCTCCGGCAGCGCCAGCCCGGAAAACACTTCTTCGAGCAAGCCGCAAGGTTTTATGGATCAGAAGTGCTGATTGCTTTGGAGTATTTACACATGATGGGAGTGATCTATAGAGACTTAAAGCCAGAAAATGTGTTGGTGAGAGAAGATGGGCATATAATGCTTTCTGACTTTGATTTATCCTTAAGATGTTTTGTTAATCCCACTCTTGTTCATCAATCCACCTCAAGCAGTACTACTGCTGGACCCACTTCATGTGAAACCTCTTCTTATTTCATCCAACCATCTTGCATTGCTCTTGATCCATCTTGCAAATTACCTCTTCATTGTGTCCAACCCTCTTGCTTTACACCTCATTTTCTTGTAAACACCTCAGAAAAATCAACCAAGAAGAGACATGATCCCGGTTCTGGCTCATCTCATCCGTTGCATTTGTTTCCCGAGATCATCATGGAGCCCACGACCGTCCGATCGATGTCGTTCGTGGGGACCCACGAGTACTTAGCGCCCGAGATCGTACGAGGAGATGGGCACGGAAGTGGTGTGGATTGGTGGACTTTTGGAATCTTCTTGTATGAATTGTTGCATGGGAAAACACCATTCAAAGGGAATGGAAACAGGGAAACACTACGCAATGTGGCTAATCAAGGGTTGAAGTTTCCAGAAGGTTCTGATAATCATCATCATAATCAGAACATAAGTTTTGCTGCTAAGGATTTGATCAGAGGTTTGCTAGTGAAGGATCCTAAGAAGAGATTGGGGTTTAAGCGAGGAGCTGTAGAGATTAAGCAGCACGCTTTCTTTCAAGGTGTTAATTGGCCCTTAATTAGAACCACCAATCCTCCCCACATTCCTAAGCCTCTTGATATTTCAATCTTTAACCCAAATTTGAGTTCACCTGCTAATAGCTCTCATAGCCATAGCTCGTCTGGGTCTTACTTAGATTTTGAATTTTTCTAA 1572 43.64 MENPPPPPSPLQDMAAQNNDMVEKSFKQSVSIMSTISGPSVSVSSMSSKNDDGSHAGQLLDVSSEKRSSSTSDDDLDSNETISRTSFRHSKPHKGNDMRWELIQKLKRKDGNIRLAHFRLLKKLGCGDIGSVYLAELRGTACLFAMKVMDKGMLVGRKKLLRAQTERDILGLLDHPFLPTLYSHFETDKFSCLLMDFCNGGDLHTLRQRQPGKHFFEQAARFYGSEVLIALEYLHMMGVIYRDLKPENVLVREDGHIMLSDFDLSLRCFVNPTLVHQSTSSSTTAGPTSCETSSYFIQPSCIALDPSCKLPLHCVQPSCFTPHFLVNTSEKSTKKRHDPGSGSSHPLHLFPEIIMEPTTVRSMSFVGTHEYLAPEIVRGDGHGSGVDWWTFGIFLYELLHGKTPFKGNGNRETLRNVANQGLKFPEGSDNHHHNQNISFAAKDLIRGLLVKDPKKRLGFKRGAVEIKQHAFFQGVNWPLIRTTNPPHIPKPLDISIFNPNLSSPANSSHSHSSSGSYLDFEFF 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 895285 896936 - Conep02aG0017300.1 Cone2ag0168 432635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0168 523 Gene3D Transferase(Phosphotransferase) domain 1 361 490 - -
Cone2ag0168 523 SUPERFAMILY Protein kinase-like (PK-like) 99 510 IPR011009 -
Cone2ag0168 523 MobiDBLite consensus disorder prediction 13 54 - -
Cone2ag0168 523 MobiDBLite consensus disorder prediction 1 94 - -
Cone2ag0168 523 Gene3D Transferase(Phosphotransferase) domain 1 198 270 - -
Cone2ag0168 523 FunFam Serine/threonine-protein kinase D6PK-like 116 201 - -
Cone2ag0168 523 CDD STKc_phototropin_like 117 494 - -
Cone2ag0168 523 SMART serkin_6 118 472 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0168 523 Pfam Protein kinase domain 362 472 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0168 523 Pfam Protein kinase domain 119 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0168 523 PANTHER FLIPPASE KINASE 1-RELATED 31 493 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone2ag0168 523 Gene3D Phosphorylase Kinase; domain 1 116 197 - -
Cone2ag0168 523 FunFam serine/threonine-protein kinase D6PK-like 360 490 - -
Cone2ag0168 523 FunFam serine/threonine-protein kinase D6PK-like 202 269 - -
Cone2ag0168 523 MobiDBLite consensus disorder prediction 67 94 - -
Cone2ag0168 523 ProSiteProfiles Protein kinase domain profile. 118 472 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0168 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0168 Cone-Chr2:895285 Cone5ag1793 Cone-Chr5:12725115 1.31E-183 dispersed
Cone16ag0885 Cone-Chr16:9214546 Cone2ag0168 Cone-Chr2:895285 0 wgd
Cone19ag0110 Cone-Chr19:615318 Cone2ag0168 Cone-Chr2:895285 6.85E-21 wgd
Cone19ag1184 Cone-Chr19:8299360 Cone2ag0168 Cone-Chr2:895285 3.78E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82592 PF07992 Pyr_redox_2 4.60E-52 CL0063 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0168 K08286 - rcu:8275994 630.557