Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0176 ATGGGTATGGAGAATTGGGATGTGGGTAAAAAATCAAAGGAAGATGGGAAGAAGCAGAAGAAGAAGGTGAAGAAAAATGAGTCGGAGGAAGAAGAGACTGGCTGTTGGGTTAAGCTGAGGTTCATGGGCAGCTGTATGCCTTCAAGATCAAAGGTTGATAGCTCTTTAAGTGGATCTAAAGTTGATAGTTTCATGAGTGGCACTACTAGTCATTACGCAGAAAGTAAGGCTAGAAACGAGGAAAGCAGAGATAAGCCCATTGCGGCTGTAGGGTCCTCTTCAACTACTAGTTATGCTGAAAGTACTTCTTCCACTCCAAAGTTTAGTGAGGAACTCAAGGTTGCTTCTCAGCTCAGAAAGTTCACATTTAACGAGCTAAAGTTAGCAACAAGAAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGTGGGTTCGGATGTGTCTTCAAAGGTTGGATCGAAGAGAACGGAACGGCTCCGGTAAAACCCGGAACTGGTCTTACAGTTGCAGTCAAGACCCTTAACCATGATGGTCTTCAAGGTCATAAAGAGTGGCTTGCTGAAGTTAATTTTCTCGGGGATCTTATTCATCCTAATTTAGTCAAATTGGTTGGTTGCTGCATTGAAGATGATCAGAGGTTATTAGTTTATGAGTTTATGCCTCGTGGAAGTTTGGAAAACCATCTCTTTAGAAAAGGGTCCCTGCCTCTTCCGTGGTCTATCAGAATGAAAATCGCACTTGGAGCCGCAAAGGGCTTAACTTTCCTTCATGAAGAAGCTCAAAGACTAGTGATCTATCGTGATTTCAAAACATCCAACATTTTGTTAGACGCGGATTACAATGCGAAACTCTCCGATTTTGGACTTGCTAAAGATGGTCCTGAGGGAGATAAAACTCATGTATCTACCCGAGTTATGGGTACTTATGGCTATGCAGCACCTGAATATGTAATGACTGGGCATTTGACCTCGAAGAGTGATGTCTACAGTTTTGGAGTGGTCCTACTCGAAATGCTAACTGGGCGAAGATCCATGGACAAGAACAGACCAAATGGGGAACATAACCTTGTGGAATGGACCAGACCACTACTTGGAGACAGAAGAAGATTCTTCCGGATAATGGATCCACGTCTCGAAGGTCACTTCTCGATCAAAGGGGCCCAAAAGGCTGCCCAGTTGGCATCCCACTGCCTCTGCCGTGACCCGAAAGCTCGGCCTATGATGAGTGAAGTTGTTGAAACCTTGAAGCCTTTGCCGAACCTCAAGGATATGGCTAGCTCGTCTTACTACTATCAGACCGTGCAATCTGGCCGACTCAGACCCAACCCAAGTGTCAAAAACGGTGCGGGTCTTAGAACACAATCCATGTTTGTACAGAGAAATGGACAGCATTTGAGAAGCTTGTCGAGCCCGAACGGTCCTCATGCTTCTCCCTATCATTATCTGCCTCAATCTCCAAAACCATCGCCTAAACCGAACAGCAGGGAACCATAG 1491 45.2 MGMENWDVGKKSKEDGKKQKKKVKKNESEEEETGCWVKLRFMGSCMPSRSKVDSSLSGSKVDSFMSGTTSHYAESKARNEESRDKPIAAVGSSSTTSYAESTSSTPKFSEELKVASQLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLIHPNLVKLVGCCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLTFLHEEAQRLVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWTRPLLGDRRRFFRIMDPRLEGHFSIKGAQKAAQLASHCLCRDPKARPMMSEVVETLKPLPNLKDMASSSYYYQTVQSGRLRPNPSVKNGAGLRTQSMFVQRNGQHLRSLSSPNGPHASPYHYLPQSPKPSPKPNSREP 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 931601 935011 + Conep02aG0018100.1 Cone2ag0176 432643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0176 496 ProSitePatterns Protein kinases ATP-binding region signature. 139 171 IPR017441 GO:0005524(InterPro)
Cone2ag0176 496 MobiDBLite consensus disorder prediction 7 33 - -
Cone2ag0176 496 MobiDBLite consensus disorder prediction 88 103 - -
Cone2ag0176 496 FunFam Probable serine/threonine-protein kinase PBL8 219 434 - -
Cone2ag0176 496 SUPERFAMILY Protein kinase-like (PK-like) 107 414 IPR011009 -
Cone2ag0176 496 Gene3D Transferase(Phosphotransferase) domain 1 219 434 - -
Cone2ag0176 496 FunFam Serine/threonine-protein kinase BIK1 100 218 - -
Cone2ag0176 496 MobiDBLite consensus disorder prediction 66 103 - -
Cone2ag0176 496 Pfam Protein kinase domain 136 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0176 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0176 496 MobiDBLite consensus disorder prediction 461 496 - -
Cone2ag0176 496 CDD STKc_IRAK 139 417 - -
Cone2ag0176 496 MobiDBLite consensus disorder prediction 1 33 - -
Cone2ag0176 496 PANTHER OS01G0588500 PROTEIN-RELATED 97 418 IPR050823 -
Cone2ag0176 496 Gene3D Phosphorylase Kinase; domain 1 94 218 - -
Cone2ag0176 496 ProSiteProfiles Protein kinase domain profile. 133 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0176 Cone-Chr2:931601 Cone7ag0532 Cone-Chr7:2475645 1.49E-212 dispersed
Cone8ag0440 Cone-Chr8:2761272 Cone2ag0176 Cone-Chr2:931601 3.12E-110 dispersed
Cone13ag0981 Cone-Chr13:8329200 Cone2ag0176 Cone-Chr2:931601 1.25E-218 wgd
Cone16ag0870 Cone-Chr16:9177028 Cone2ag0176 Cone-Chr2:931601 0 wgd
Cone19ag0973 Cone-Chr19:7376643 Cone2ag0176 Cone-Chr2:931601 2.46E-211 wgd
Cone2ag0176 Cone-Chr2:931601 Cone2ag0855 Cone-Chr2:34546743 3.01E-134 wgd
Cone2ag0176 Cone-Chr2:931601 Cone4ag0556 Cone-Chr4:2508175 1.53E-215 wgd
Cone2ag0176 Cone-Chr2:931601 Cone6ag0606 Cone-Chr6:2979059 4.53E-139 wgd
Cone2ag0176 Cone-Chr2:931601 Cone7ag0529 Cone-Chr7:2457001 1.12E-220 wgd
Cone2ag0176 Cone-Chr2:931601 Cone9ag0611 Cone-Chr9:2891069 2.32E-144 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82593 PF13246 Cation_ATPase 1.50E-09 CL0137 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0176 - - - 0.0