Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0193 ATGATGATGCAAACCATGGACTTAACTCCAATAGTAACCACTACAAACACAACAAGCGCTACCTCAAAATCGCCCGAACCCGATAGCGGCGGAACACCCACGCGACTGCACACCTCCGCCGCAGCCAAGCCACTAAACTCCACCAACGGCATCCTCAAACTCCACCACCATCCGCTCAACCAACACTTCAGTGGCCTTCCCGACCACCATAACCGCCTTCTAACCGTCGTCACCTACAAAGAATGCCTCAAAAACCACGCCGCCACCTTAGGAACCCACGCGCTCGACGGCTGTGGAGAATTCATGCCATCTCCCACCTCTACGTCAGCCGATCCTACCTCGCTAAAATGTGCCGCCTGTGGCTGCCACCGTAACTTTCATCGCAAAGATCCAGAAGAACCCATCTCCCCCACCGCCGCCGCTGCCACCACCCACTTAATCGAATACCAACCCCACCACCGCCACCACCCACTTGCTCCACCAGCACCTTCGCGGCTAATTCCACTCGCCAACCGGAGCCCAAACTCCTCTCCGCCGCCGATCTCCTCCTCTTACTACCCCTCAGCTCCCCACATGCTCTTAGCTCTCTCCTCCGGTTTATCCGGTCCCCAAGAAAACTCTACAACTCATTCAAGGAAGAGATTCAGGACTAAGTTCAGTCAAGAACAGAAGCTCAAGATGTACCATTTAGCAGAGAGAGTCGGCTGGAAGATGCAGAGAAGAGACGATGAGCTGATTCAGGATTTCTGTAACGAAATCGGAATCGATAGAGGAGTGCTCAAGGTGTGGTTGCATAATAATAAGAACTCGTTGGGAAGGAAGGCGATTAATATTAATGACAGTAACAGTGATATTAATATCAATGGCGGTGCTAGGGCTCATGAGGAGATCATTGGACATGATAACAGAGTTCAGAATGATGATGAGGAAGAAGATGATGATCATGAAGATGACAATGACCATATGGGTAGAGATGAAGACAATGAACATGCCGGCGTTAATGGCGGTTCTTCTTAG 1017 50.93 MMMQTMDLTPIVTTTNTTSATSKSPEPDSGGTPTRLHTSAAAKPLNSTNGILKLHHHPLNQHFSGLPDHHNRLLTVVTYKECLKNHAATLGTHALDGCGEFMPSPTSTSADPTSLKCAACGCHRNFHRKDPEEPISPTAAAATTHLIEYQPHHRHHPLAPPAPSRLIPLANRSPNSSPPPISSSYYPSAPHMLLALSSGLSGPQENSTTHSRKRFRTKFSQEQKLKMYHLAERVGWKMQRRDDELIQDFCNEIGIDRGVLKVWLHNNKNSLGRKAININDSNSDININGGARAHEEIIGHDNRVQNDDEEEDDDHEDDNDHMGRDEDNEHAGVNGGSS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1019885 1021279 - Conep02aG0019800.1 Cone2ag0193 432660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0193 338 MobiDBLite consensus disorder prediction 151 184 - -
Cone2ag0193 338 FunFam Zinc-finger homeodomain protein 2 200 273 - -
Cone2ag0193 338 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 47 270 - GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER)
Cone2ag0193 338 MobiDBLite consensus disorder prediction 297 338 - -
Cone2ag0193 338 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 79 130 IPR006456 -
Cone2ag0193 338 MobiDBLite consensus disorder prediction 1 38 - -
Cone2ag0193 338 Pfam ZF-HD protein dimerisation region 77 131 IPR006456 -
Cone2ag0193 338 NCBIfam homeobox domain, ZF-HD class 212 269 IPR006455 -
Cone2ag0193 338 MobiDBLite consensus disorder prediction 306 320 - -
Cone2ag0193 338 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 78 130 IPR006456 -
Cone2ag0193 338 Gene3D - 197 272 - -
Cone2ag0193 338 SUPERFAMILY Homeodomain-like 202 273 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0539 Cone-Chr20:2995418 Cone2ag0193 Cone-Chr2:1019885 9.47E-47 dispersed
Cone2ag0193 Cone-Chr2:1019885 Cone6ag0586 Cone-Chr6:2878195 6.56E-51 dispersed
Cone16ag0849 Cone-Chr16:9062314 Cone2ag0193 Cone-Chr2:1019885 3.64E-163 wgd
Cone2ag0193 Cone-Chr2:1019885 Cone4ag0542 Cone-Chr4:2443471 1.68E-79 wgd
Cone2ag0193 Cone-Chr2:1019885 Cone7ag0516 Cone-Chr7:2383591 9.33E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45688 PF00069 Pkinase 2.20E-12 CL0016 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0193 - - - 0.0