Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone2ag0195 | ATGACGACCATCGATGGTGAAGATAAGACAAATGTACTATCTAATGTCTCACCACAAAACAGTACTTGTGACAAAAAACCAACTAGAACCTGGTCTCTTCTCCGAAAGCTAGTAGCAGAGATCATAGCAACTTATTTACTGGTGTTTATTACGTGCGGGGCGGCTGCTTTGAGTGTTTCTGATGAAACGAGAGTTTCGAAACTCGGAGCCTCCATTGCAGGAGGTCTCGTAGTGACTGTCATGATCTACGCTGTAGGGCACATCTCCGGTGCACATATGAACCCGGCCGTCACTTTCGCCTTTGCTGTTGTTCGACACTTTCCATGGAAACAAGTGCCATTTTATGCAGCATCTCAGTTAGGAGGAGCAATATCTGCTGCATATACATTACGAATTCTATTACATCCGATAAAACAACTCGGTACCACGACACCTTCCGGAACAAATCTTCAAGCTCTAGTCATGGAGATTGTTGTTACGTTTTCGATGATGTTCGTCACTTCTGCCGTGGCAACTGATACAAAAGCTATAGGTGAGCTTGCAGGTATAGCGGTCGGATCTGCCGTTTGCATCACATCCATCTTAGCCGGACCAGTATCAGGAGGATCAATGAACCCAGCAAGAACACTTGGGCCAGCACTTGCAAGTGGGGACTACAAAGGGCTATGGATCTACGTGGTCGGGCCAGTTAGCGGAACACTATTAGGATCGTTGTCTTATAACTTCATAAGGGTATCCGACAAACCAGCTGCAGCCATTCCTCTAACTTCATTTGCTTCATTCAAGCTTCTTCGACGAGGAAAGTCTTCTGATCATGATCACCCAGATCTAATTAGTGCAACTTGCAACAATAACAACGTCTAA | 864 | 45.37 | MTTIDGEDKTNVLSNVSPQNSTCDKKPTRTWSLLRKLVAEIIATYLLVFITCGAAALSVSDETRVSKLGASIAGGLVVTVMIYAVGHISGAHMNPAVTFAFAVVRHFPWKQVPFYAASQLGGAISAAYTLRILLHPIKQLGTTTPSGTNLQALVMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSILAGPVSGGSMNPARTLGPALASGDYKGLWIYVVGPVSGTLLGSLSYNFIRVSDKPAAAIPLTSFASFKLLRRGKSSDHDHPDLISATCNNNNV | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1031566 | 1033531 | - | Conep02aG0020000.1 | Cone2ag0195 | 432662 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone2ag0195 | 287 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cone2ag0195 | 287 | SUPERFAMILY | Aquaporin-like | 28 | 249 | IPR023271 | - | |
Cone2ag0195 | 287 | FunFam | Aquaporin NIP2-1 | 23 | 253 | - | - | |
Cone2ag0195 | 287 | CDD | MIP | 35 | 243 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone2ag0195 | 287 | PRINTS | Major intrinsic protein family signature | 111 | 130 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone2ag0195 | 287 | PRINTS | Major intrinsic protein family signature | 35 | 54 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone2ag0195 | 287 | PRINTS | Major intrinsic protein family signature | 186 | 208 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone2ag0195 | 287 | PRINTS | Major intrinsic protein family signature | 74 | 98 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone2ag0195 | 287 | PRINTS | Major intrinsic protein family signature | 223 | 243 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone2ag0195 | 287 | PRINTS | Major intrinsic protein family signature | 155 | 173 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone2ag0195 | 287 | Gene3D | Glycerol uptake facilitator protein. | 2 | 251 | IPR023271 | - | |
Cone2ag0195 | 287 | ProSitePatterns | MIP family signature. | 92 | 100 | IPR022357 | - | |
Cone2ag0195 | 287 | PANTHER | AQUAPORIN NIP2-1 | 22 | 248 | IPR034294 | - | |
Cone2ag0195 | 287 | Pfam | Major intrinsic protein | 29 | 240 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone2ag0195 | Cone-Chr2:1031566 | Cone9ag0941 | Cone-Chr9:4650979 | 3.90E-72 | dispersed | |
Cone16ag0847 | Cone-Chr16:9050087 | Cone2ag0195 | Cone-Chr2:1031566 | 1.84E-170 | wgd | |
Cone2ag0195 | Cone-Chr2:1031566 | Cone20ag1150 | Cone-Chr20:7806133 | 5.85E-67 | wgd | |
Cone2ag0195 | Cone-Chr2:1031566 | Cone4ag0541 | Cone-Chr4:2431182 | 1.73E-119 | wgd | |
Cone2ag0195 | Cone-Chr2:1031566 | Cone7ag0514 | Cone-Chr7:2368611 | 9.81E-39 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone2ag0195 | K09874 | - | vvi:100265406 | 380.563 |