Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0195 ATGACGACCATCGATGGTGAAGATAAGACAAATGTACTATCTAATGTCTCACCACAAAACAGTACTTGTGACAAAAAACCAACTAGAACCTGGTCTCTTCTCCGAAAGCTAGTAGCAGAGATCATAGCAACTTATTTACTGGTGTTTATTACGTGCGGGGCGGCTGCTTTGAGTGTTTCTGATGAAACGAGAGTTTCGAAACTCGGAGCCTCCATTGCAGGAGGTCTCGTAGTGACTGTCATGATCTACGCTGTAGGGCACATCTCCGGTGCACATATGAACCCGGCCGTCACTTTCGCCTTTGCTGTTGTTCGACACTTTCCATGGAAACAAGTGCCATTTTATGCAGCATCTCAGTTAGGAGGAGCAATATCTGCTGCATATACATTACGAATTCTATTACATCCGATAAAACAACTCGGTACCACGACACCTTCCGGAACAAATCTTCAAGCTCTAGTCATGGAGATTGTTGTTACGTTTTCGATGATGTTCGTCACTTCTGCCGTGGCAACTGATACAAAAGCTATAGGTGAGCTTGCAGGTATAGCGGTCGGATCTGCCGTTTGCATCACATCCATCTTAGCCGGACCAGTATCAGGAGGATCAATGAACCCAGCAAGAACACTTGGGCCAGCACTTGCAAGTGGGGACTACAAAGGGCTATGGATCTACGTGGTCGGGCCAGTTAGCGGAACACTATTAGGATCGTTGTCTTATAACTTCATAAGGGTATCCGACAAACCAGCTGCAGCCATTCCTCTAACTTCATTTGCTTCATTCAAGCTTCTTCGACGAGGAAAGTCTTCTGATCATGATCACCCAGATCTAATTAGTGCAACTTGCAACAATAACAACGTCTAA 864 45.37 MTTIDGEDKTNVLSNVSPQNSTCDKKPTRTWSLLRKLVAEIIATYLLVFITCGAAALSVSDETRVSKLGASIAGGLVVTVMIYAVGHISGAHMNPAVTFAFAVVRHFPWKQVPFYAASQLGGAISAAYTLRILLHPIKQLGTTTPSGTNLQALVMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSILAGPVSGGSMNPARTLGPALASGDYKGLWIYVVGPVSGTLLGSLSYNFIRVSDKPAAAIPLTSFASFKLLRRGKSSDHDHPDLISATCNNNNV 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1031566 1033531 - Conep02aG0020000.1 Cone2ag0195 432662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0195 287 MobiDBLite consensus disorder prediction 1 21 - -
Cone2ag0195 287 SUPERFAMILY Aquaporin-like 28 249 IPR023271 -
Cone2ag0195 287 FunFam Aquaporin NIP2-1 23 253 - -
Cone2ag0195 287 CDD MIP 35 243 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone2ag0195 287 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone2ag0195 287 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone2ag0195 287 PRINTS Major intrinsic protein family signature 186 208 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone2ag0195 287 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone2ag0195 287 PRINTS Major intrinsic protein family signature 223 243 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone2ag0195 287 PRINTS Major intrinsic protein family signature 155 173 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone2ag0195 287 Gene3D Glycerol uptake facilitator protein. 2 251 IPR023271 -
Cone2ag0195 287 ProSitePatterns MIP family signature. 92 100 IPR022357 -
Cone2ag0195 287 PANTHER AQUAPORIN NIP2-1 22 248 IPR034294 -
Cone2ag0195 287 Pfam Major intrinsic protein 29 240 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0195 Cone-Chr2:1031566 Cone9ag0941 Cone-Chr9:4650979 3.90E-72 dispersed
Cone16ag0847 Cone-Chr16:9050087 Cone2ag0195 Cone-Chr2:1031566 1.84E-170 wgd
Cone2ag0195 Cone-Chr2:1031566 Cone20ag1150 Cone-Chr20:7806133 5.85E-67 wgd
Cone2ag0195 Cone-Chr2:1031566 Cone4ag0541 Cone-Chr4:2431182 1.73E-119 wgd
Cone2ag0195 Cone-Chr2:1031566 Cone7ag0514 Cone-Chr7:2368611 9.81E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0195 K09874 - vvi:100265406 380.563