Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0261 ATGGCAACTATAGTCTCCGAATCCGACTATGATAGTAGTTGTTCATCAATAACCGTACCGGACTCGACCCGGAGCTGGATATCCAACCTGAGCTTCGGAAGCAACCGCCTAAGTTCTGTCTCGGTCCAATCAACTCCTGCAGATCTAGTCCCGTTATCACTTTACGCTTCCCAAAAACCCCACAAAGCTAACCAGGCTGCATGGGAAGCCATGCGGCAGTTAAGGGCGGTGAAAGACGGCCGAGTCGGGTTGGAACACTTCCGACTCCTACGCCGCCTGGGGAGCGGTGATATCGGAAACGTATATCTATGTCAGATACGGAACATTCCGGTTCCGGCGAAGGGTGGTTTGGCGCGTCCTCCTCCTCCTGAATGCATGTATGCTATGAAAGTGGTGGATAGGGAAGCACTTGCTGTAAGGAACAAGTTGGGGAGAGCAGAGATGGAGAAGGAAATTCTGGGGATGCTTGATCACCCTTTCTTGCCTACTCTCTATGCTGAGTTTGAGGCTTCTCATTACTCTTGCTTGGTTATGGAGTTTTGTCCCGGCGGCGATCTTTACGCCGCCCGGCAACGCCTTCCCGGAAAACGCTTCAGCGTTTCAGCCGCTAAGTTCTACGCAGCAGAAACAATCTTAGCCATAGAGTATCTGCACATGATGGGAATAGTTTACAGAGACTTAAAGCCAGAAAATGTCCTCGTTAGAGAAGATGGTCATATCATGCTTTCAGACTTTGATCTTTGCCTCAAATGCGAGGTCGTTCCAAAGCTTTTAAGATCACAAACCACAAAGTATCACAAAAGGCATGCAATTACCAAAGTATCCTCATCCTCCTCCTCACCATCATCACCTACACCTTCTTGCTATTCCATATCATCATCACCCATGCAACCTGTCCTCTCCTGCTTCTCTAAATCCTCCAGAAAGAAAAAATCACCTAAAACCATCACCACGATAACAGAACAAGCCCATAGTAATGATCACCATCACGATCATCATGATCATGATAGCGATCAAGAATATTATGATCCGGAGCTAGTAGCGGAGCCAATAGAGGCAAGATCAAAATCATTTGTTGGGACCCACGAGTACTTGGCCCCAGAAGTGATATCAGGACAAGGTCATGGGAGTGCAGTTGATTGGTGGACCCTAGGCGTGTTTCTGTACGAGCTGCTGTACGGGAAAACTCCATTCAAGGGTGAAAACAATGAGCAAACCCTAATCAACATACTTAAGCAGCCATTAAGCTTTCCAAGAAGCTACAGCAACGTAAGAAGTTGTAGCGAAGAGGAGGAGGAGATGTGGAGGGTTGAGGATTTGATCAGGAAGCTTCTGGTGAAGAATCCAAAGAAGAGGATGGGAGGATTAAAGGGTTCTGTTGAGATTAAGAGGCATGATTTCTTTAAGGGTGTTAATTGGGCATTGATTAGGTCTGTTAAGCCACCTCAAAACCCGAATTGTAACACTAATGATAGTGATAATCGTATTAAGAGTAAGATTAGGGCTAATTACTTACCAAAGTTGCTGAGCAAGAAGGAAAGGGAGGAACCTTATCAGATTCCTCAACATCATCAACATCAATATCCTCATCATTCTCATCATCATCATCATCATGTTGAGTACTTTTAA 1629 45.73 MATIVSESDYDSSCSSITVPDSTRSWISNLSFGSNRLSSVSVQSTPADLVPLSLYASQKPHKANQAAWEAMRQLRAVKDGRVGLEHFRLLRRLGSGDIGNVYLCQIRNIPVPAKGGLARPPPPECMYAMKVVDREALAVRNKLGRAEMEKEILGMLDHPFLPTLYAEFEASHYSCLVMEFCPGGDLYAARQRLPGKRFSVSAAKFYAAETILAIEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLCLKCEVVPKLLRSQTTKYHKRHAITKVSSSSSSPSSPTPSCYSISSSPMQPVLSCFSKSSRKKKSPKTITTITEQAHSNDHHHDHHDHDSDQEYYDPELVAEPIEARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYELLYGKTPFKGENNEQTLINILKQPLSFPRSYSNVRSCSEEEEEMWRVEDLIRKLLVKNPKKRMGGLKGSVEIKRHDFFKGVNWALIRSVKPPQNPNCNTNDSDNRIKSKIRANYLPKLLSKKEREEPYQIPQHHQHQYPHHSHHHHHHVEYF 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1333294 1335036 - Conep02aG0027100.1 Cone2ag0261 432728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0261 542 MobiDBLite consensus disorder prediction 269 293 - -
Cone2ag0261 542 MobiDBLite consensus disorder prediction 526 542 - -
Cone2ag0261 542 Gene3D Transferase(Phosphotransferase) domain 1 353 486 - -
Cone2ag0261 542 MobiDBLite consensus disorder prediction 516 542 - -
Cone2ag0261 542 Gene3D Transferase(Phosphotransferase) domain 1 181 250 - -
Cone2ag0261 542 Pfam Protein kinase domain 89 253 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0261 542 Pfam Protein kinase domain 355 468 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0261 542 SUPERFAMILY Protein kinase-like (PK-like) 84 535 IPR011009 -
Cone2ag0261 542 FunFam protein kinase PINOID 181 249 - -
Cone2ag0261 542 FunFam serine/threonine-protein kinase D6PK-like 353 486 - -
Cone2ag0261 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0261 542 ProSiteProfiles Protein kinase domain profile. 87 468 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0261 542 Gene3D Phosphorylase Kinase; domain 1 85 180 - -
Cone2ag0261 542 PANTHER FLIPPASE KINASE 1-RELATED 38 501 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone2ag0261 542 MobiDBLite consensus disorder prediction 272 293 - -
Cone2ag0261 542 SMART serkin_6 87 468 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0261 542 FunFam protein kinase PINOID 2 85 180 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0987 Cone-Chr15:7895874 Cone2ag0261 Cone-Chr2:1333294 2.78E-117 dispersed
Cone2ag0261 Cone-Chr2:1333294 Cone5ag1793 Cone-Chr5:12725115 5.68E-136 dispersed
Cone16ag0780 Cone-Chr16:8698556 Cone2ag0261 Cone-Chr2:1333294 2.28e-313 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82594 PF00230 MIP 4.90E-57 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0261 K08286 - mdm:103400453 662.529