Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0274 ATGGCGGTGGCGGCGGCTGTTTTCTGGGTATTATTTCTGGCACTGAGTCAGCAGCTTAACTCGGAGCCCACTCAGGACAAGCAAGCGCTTATTGCTTTCTTGGCTCAGACGCCGCATTCGAACCGGGTACGGTGGAACACGTCCGATTCGGCTTGCAATTGGGTTGGAGTAGGATGCGGTCCGGATCAGTCGTTTGTGTATGAGCTCCGTTTACCCGGCGCTGGGCTTGTGGGCCGTATCCCGCCCAATACAATTGGGCTGCTTAGTCAGCTCCGAGTTCTGAGTCTCCGTTCTAACCGTCTCTCCGGTGAGCTCCCCTCAGATTTCTCGAATTTGACATTTCTCCGTAGTCTCTACCTTCAGGATAATCGATTATCTGGCGAGTTTCCGACGACTTTGACTCGGTTGACTCGTCTTAATCGTCTCGATTTATCCTCCAACAATTTTACTGGCACGATTCCTTTCGCGGTCAACAATCTGACTCACTTGACCGGACTTTTCTTGGAAAGTAACGGATTCTCCGGCTCACTTCCGAGAATTCCATCTGTGAATTTAACGAACTTCAATGTATCTAACAACAAGCTAAATGGCTCAATCCCTGAGACGTTAGCGAGATTTCCTGAATCCTCCTTCGCCGGAAACTTAGATCTATGCGGTAAACCACTACCGCCTTGCAATCCATTCTTTCCGTCACCAGCTCCGTCACCGTCCGAACAACCTCCGTCAAATTCAGTCAAAAAACACTCTAAGAAGCTCTCAACCGGCGGCATTATCGGAATCGTCATCGGCTGCGTTGTCTTCGCCTTCATCTTGCTTCTACTTCTCATCCTCTGCCTCCGTCGCAGAGATCGTCGGAAACCGTCAAAAGCACCTAAACCAGTAGCTGCAGCACGATCTGTGCCGGTCGCAGAAGCAGGAACGTCGTCCTCGAAAGACGATCTAACCACCGAATCAGCAGCGGAGGCGGAGAGAAACAAGCTAGTTTTCTTCGACAGCGGAGGTTACACTTTCGATCTAGAGGATCTATTACGAGCTTCGGCGGAGGTCCTGGGGAAAGGAAGCGTAGGGACGTCGTACAAGGCGGTGTTAGAAGAAGGCACGACAGTTGTCGTTAAGCGGTTAAAAGACGTGGTGGTTACGAAGAAAGAGTTCGAGATCCAAATGGATGCCGTCGGAAAAATCAACCACGAAAATGTAGTTCCTCTTAGAGCCTTCTACTACTCTAAGGATGAGAAGCTTCTCGTTTTCGATTTCATCGCCGCCGGAAGCTTGTCTTCTTCCCTTCACGGGAGTAGAGGATCCGGTCGAACCCCACTCGACTGGGACGCCCGAAGAAAAATTGCACTAGGTGCAGCCCGGGGCCTGGCTAACCTACACGGGTCTGGAAAACTGGCCCACGGAAATATCAAATCATCCAATGTCCTGCTCCGACCTGACAACAACCCGTGTTTATCGGATTTCGGACTCAACCCGCTTTTCGGGACTGCAACCCCGCCAAACCGGGTTGCAGGATATCGGGCCCCGGAAGTGGTCGAGACTCGGAAGGTGACGTTCAAATCGGACGTATACAGTTTTGGCGTGTTGCTGTTAGAGCTGTTAACGGGAAAAGCACCGAATCAAGCATCGTTAAGCGATCAGGATGGGATCGATCTACCAAGGTGGGTCCAATCGGTAGTAAGGGAGGAATGGACGGCTGAGGTGTTTGACGTGGAATTGATGAGGTATCATAATATCGAGGAGGAGATGGTGCAGCTGTTGCAGATAGCAATGTCATGTGTATCGACGGTACCGGATGCTAGACCCGGCATGGCAAATGTGGTTAAAATGATTGAGGAAGTGAGTAGAAGTAGTGGTGAGACGGATGACGGGTTACGACAATCGTCGGACGACCCTTCGAAGTGA 1902 51.05 MAVAAAVFWVLFLALSQQLNSEPTQDKQALIAFLAQTPHSNRVRWNTSDSACNWVGVGCGPDQSFVYELRLPGAGLVGRIPPNTIGLLSQLRVLSLRSNRLSGELPSDFSNLTFLRSLYLQDNRLSGEFPTTLTRLTRLNRLDLSSNNFTGTIPFAVNNLTHLTGLFLESNGFSGSLPRIPSVNLTNFNVSNNKLNGSIPETLARFPESSFAGNLDLCGKPLPPCNPFFPSPAPSPSEQPPSNSVKKHSKKLSTGGIIGIVIGCVVFAFILLLLLILCLRRRDRRKPSKAPKPVAAARSVPVAEAGTSSSKDDLTTESAAEAERNKLVFFDSGGYTFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEIQMDAVGKINHENVVPLRAFYYSKDEKLLVFDFIAAGSLSSSLHGSRGSGRTPLDWDARRKIALGAARGLANLHGSGKLAHGNIKSSNVLLRPDNNPCLSDFGLNPLFGTATPPNRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLSDQDGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMSCVSTVPDARPGMANVVKMIEEVSRSSGETDDGLRQSSDDPSK 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1410258 1413109 - Conep02aG0028400.1 Cone2ag0274 432741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0274 633 Pfam Leucine Rich Repeat 184 205 IPR001611 GO:0005515(InterPro)
Cone2ag0274 633 Pfam Leucine Rich Repeat 90 112 IPR001611 GO:0005515(InterPro)
Cone2ag0274 633 ProSiteProfiles Protein kinase domain profile. 344 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0274 633 Pfam Leucine rich repeat 115 172 IPR001611 GO:0005515(InterPro)
Cone2ag0274 633 MobiDBLite consensus disorder prediction 229 248 - -
Cone2ag0274 633 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 419 624 - -
Cone2ag0274 633 FunFam pollen receptor-like kinase 1 313 418 - -
Cone2ag0274 633 Pfam Protein kinase domain 348 608 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0274 633 Gene3D Transferase(Phosphotransferase) domain 1 419 622 - -
Cone2ag0274 633 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Cone2ag0274 633 PANTHER OS05G0588300 PROTEIN 7 618 IPR050994 -
Cone2ag0274 633 MobiDBLite consensus disorder prediction 614 633 - -
Cone2ag0274 633 Gene3D Ribonuclease Inhibitor 185 225 IPR032675 -
Cone2ag0274 633 SUPERFAMILY Protein kinase-like (PK-like) 348 610 IPR011009 -
Cone2ag0274 633 FunFam Probable inactive receptor kinase RLK902 23 181 - -
Cone2ag0274 633 MobiDBLite consensus disorder prediction 613 633 - -
Cone2ag0274 633 Pfam Leucine rich repeat N-terminal domain 24 59 IPR013210 -
Cone2ag0274 633 SUPERFAMILY L domain-like 27 206 - -
Cone2ag0274 633 MobiDBLite consensus disorder prediction 288 318 - -
Cone2ag0274 633 Gene3D Phosphorylase Kinase; domain 1 309 418 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1640 Cone-Chr1:57709724 Cone2ag0274 Cone-Chr2:1410258 2.33E-74 dispersed
Cone20ag0203 Cone-Chr20:874691 Cone2ag0274 Cone-Chr2:1410258 1.91E-67 dispersed
Cone2ag0274 Cone-Chr2:1410258 Cone3ag0485 Cone-Chr3:2368876 6.18E-150 dispersed
Cone5ag0777 Cone-Chr5:3320127 Cone2ag0274 Cone-Chr2:1410258 1.36E-50 dispersed
Cone16ag0765 Cone-Chr16:8626927 Cone2ag0274 Cone-Chr2:1410258 1.07e-316 wgd
Cone2ag0274 Cone-Chr2:1410258 Cone4ag0703 Cone-Chr4:3675336 9.68E-234 wgd
Cone2ag0274 Cone-Chr2:1410258 Cone7ag0668 Cone-Chr7:3576910 7.45E-226 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82595 PF07651 ANTH 2.70E-83 CL0009 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0274 - - - 0.0