Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0284 ATGAAGAAGAAGACGAACTTCTCTCTCACTCCTCTCTCTCACCTCCTCATCTCTCTCTTTCTAGCCACATTTCTCTCTCTCTGTAGCTCAGAGAAGCTCACAATCCGCCATGGAAGCAGCCTCACTGAAGCTGAAGCTCATTACATAAAGCAGCGGCAGCTTCTCTCCTACAGAGATGAGTTCAGTGACCGAGGTGAAAAGGTTACCATCGACCCATCTTTTGTTTTTGAAAATGAACGGCTGAGAAATGCTTACATAGCATTACAGGCCTGGAAGCAGGCTATCCTCTCTGACCCATATAATCTCACTCAAAATTGGGCCGGCCCAAATGTCTGTAGCTATGAAGGTGTTTTCTGTGCTCCGGCGCTGGATAACAGCACCATCCGTACCGTCGCAGGAATTGACCTCAACCACGGCGACATTGCCGGTTACTTGCCGGAGGAGCTAGGTCTTCTGCAAGATCTTGCATTATTTCACATCAACTCGAACAGATTCTGCGGAACTGTTCCTCACAAGTTTAAGAAGTTGAAACTTCTCTTCGAATTGGATCTTAGTAACAACCGCTTCGCCGGAAAGTTTCCTACAGTTGTGCTTGGGCTTCCGGCTTTGAAGTTTCTGGATCTGAGGTTTAACGAATTCGAAGGTACGGTGCCTAAGGAGCTGTTCGATAAGGACTTGGACGCGATCTTTATCAATCACAATCGGTTCCGGTTCGAGCTGCCGGAAAATTTCGGTAACTCGCCGGTGTCGGTCATCGTCCTTGCTAACAATAAGTTTCACGGCTGTGTTCCGGCGAGCTTGGGCAACATGACGGGGCTGAATGAGATAATTATGATGAACAATGGATTCCGATCCTGTTTGCCACCTGAGATAGGGTTTTTGAAGAACTTGACGGTGTTTGACGTGAGCAATAACGAGCTGCTCGGACCTTTGCCGGAGACTATAGGCGGAATGGAGAGCTTAGAGCAGTTGAATGTGGCGCATAATCTTCTCTCCGGCAGTATTCCGGAGAGTATATGTGAATTGCCGAACCTTCAGAACTTCACGTTCTCTTATAATTTCTTCACCGGCGAGCCAACCTCGTGCTTAAGGGTGGCAGATTTCGATGACAGGAGAAATTGTTTGCCTGCGAGGCCGGTTCAGAGGTCGCAGACGCAATGTAAGTCGTTCTTGTCTAAGCCTGTGGATTGTAGTTCGTTTAGCTGTAAAAGGTTTGTTCCGTCTTTGCCGCCGCCGCCTCCGCCATCACCTCCGGTGGCGCTTTCGCCACCACCTCCTCCACCTGAATCTTCTTCTTCACCGGTTTACAGACGTCGTTCGCCTCCACCGACTCCATCTTCTCCTCCGCCTCCAGTATACTCTCCACCACCTCCAGTTTACTCTCCTCCAACGCCGCCGCCTTCTCCTCCTTCCCCACCTCCACCCGTCTACTCACCGCCTCCCCCTTCTCCACCTCCGCCATCCCCTCCGCCGCCAGTTTATTCACCACCACCTCCTCCTCCTCCATCCCCTCCACCACCAGTTTATTCACCACCACCACCTCCTCCTCCATCCCCTCCACCACCAGTTTATTCACCACCACCACCTCCTCCTCCATCCCCACCTCCACCAGTTTATTCTCCACCACCACCTCCACTCTCTCCATCTCCACCTCCACCCGTATATTGTGTCCGGCCATCTCCACCACCTCCACCACCAAACTCACCACCCCCTCCACCAAATTCACCACCACCACCTCCCCCCATATTCTCACCACCCCCACCCGTCTACTATTACAGCTCACCACCACCTCCACCACCCCATCACTCACCTCCTCCGCCACCCCACTCACCTCCTCCGCCACCCCACTCACCACCTCCGCCTCCTCGCTCCCCTCCACCACCAATTTATCCCTACCTATCCCCACCACCTCCACCACCTTCACCATCACCTCCACCACCACCTGTCTACTCTCCCCCTCCACCACCACCTTGTATAGAACCACCTCCACCTCCTCCACCATGCATAGAATATTCTGAACCACCCCCACCACCTCCATCGCCCACTCCATACTTGCCTCCACCATCCCCATCTCCTCCTCCTCCTTACGTTTATGTAAGCCCTCCACCACCTCCTACACCTGCTTATCAGGGGCCTTTGCCGCCAATTCAAGGAGTCTCATACGCTTCTCCTCCCCCACCACCTTTCTATTGA 2193 52.94 MKKKTNFSLTPLSHLLISLFLATFLSLCSSEKLTIRHGSSLTEAEAHYIKQRQLLSYRDEFSDRGEKVTIDPSFVFENERLRNAYIALQAWKQAILSDPYNLTQNWAGPNVCSYEGVFCAPALDNSTIRTVAGIDLNHGDIAGYLPEELGLLQDLALFHINSNRFCGTVPHKFKKLKLLFELDLSNNRFAGKFPTVVLGLPALKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFRFELPENFGNSPVSVIVLANNKFHGCVPASLGNMTGLNEIIMMNNGFRSCLPPEIGFLKNLTVFDVSNNELLGPLPETIGGMESLEQLNVAHNLLSGSIPESICELPNLQNFTFSYNFFTGEPTSCLRVADFDDRRNCLPARPVQRSQTQCKSFLSKPVDCSSFSCKRFVPSLPPPPPPSPPVALSPPPPPPESSSSPVYRRRSPPPTPSSPPPPVYSPPPPVYSPPTPPPSPPSPPPPVYSPPPPSPPPPSPPPPVYSPPPPPPPSPPPPVYSPPPPPPPSPPPPVYSPPPPPPPSPPPPVYSPPPPPLSPSPPPPVYCVRPSPPPPPPNSPPPPPNSPPPPPPIFSPPPPVYYYSSPPPPPPHHSPPPPPHSPPPPPHSPPPPPRSPPPPIYPYLSPPPPPPSPSPPPPPVYSPPPPPPCIEPPPPPPPCIEYSEPPPPPPSPTPYLPPPSPSPPPPYVYVSPPPPPTPAYQGPLPPIQGVSYASPPPPPFY 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1476204 1479301 - Conep02aG0029400.1 Cone2ag0284 432751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0284 730 MobiDBLite consensus disorder prediction 409 579 - -
Cone2ag0284 730 Pfam Leucine rich repeat N-terminal domain 87 119 IPR013210 -
Cone2ag0284 730 Gene3D Ribonuclease Inhibitor 85 245 IPR032675 -
Cone2ag0284 730 MobiDBLite consensus disorder prediction 664 730 - -
Cone2ag0284 730 FunFam Leucine-rich repeat extensin-like protein 1 85 246 - -
Cone2ag0284 730 Pfam Leucine rich repeat 296 353 IPR001611 GO:0005515(InterPro)
Cone2ag0284 730 Pfam Leucine rich repeat 156 212 IPR001611 GO:0005515(InterPro)
Cone2ag0284 730 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 528 IPR051582 -
Cone2ag0284 730 SUPERFAMILY L domain-like 85 361 - -
Cone2ag0284 730 MobiDBLite consensus disorder prediction 596 651 - -
Cone2ag0284 730 Gene3D Ribonuclease Inhibitor 246 374 IPR032675 -
Cone2ag0284 730 FunFam Leucine-rich repeat extensin-like protein 5 247 386 - -
Cone2ag0284 730 PRINTS Pistil-specific extensin-like signature 445 463 IPR003882 -
Cone2ag0284 730 PRINTS Pistil-specific extensin-like signature 552 573 IPR003882 -
Cone2ag0284 730 PRINTS Pistil-specific extensin-like signature 410 433 IPR003882 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0284 Cone-Chr2:1476204 Cone5ag1503 Cone-Chr5:10171994 1.22E-36 dispersed
Cone16ag0754 Cone-Chr16:8541821 Cone2ag0284 Cone-Chr2:1476204 2.43E-132 wgd
Cone2ag0284 Cone-Chr2:1476204 Cone4ag0716 Cone-Chr4:3857442 8.87E-86 wgd
Cone2ag0284 Cone-Chr2:1476204 Cone4ag1835 Cone-Chr4:13239822 1.10E-55 wgd
Cone2ag0284 Cone-Chr2:1476204 Cone7ag0673 Cone-Chr7:3656919 8.25E-87 wgd
Cone2ag0284 Cone-Chr2:1476204 Cone7ag1740 Cone-Chr7:11517867 1.55E-28 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0284 - - - 0.0