Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0294 ATGTCGACCCCAGCTCCGGGATCAGCCCCGGCGCCGCCCTCACCGCCGTCGACGAACGCAACATCTCCTCCACTACCGGCAGCCCCTGCCTCTCCACCTCCAGCCACTCCTTCGGCGCCTCCTCCAGCTACACCATCGTCATCACCACCGCCTCCTACCACTGCCTCTCCGCCGGCGCCGTCTACGGAATCTCCCCCGCCTCCGTCATCCACGACACCGTCTCCTCCGGTGGCTCGGAGTCCTCCACCGCCTCCAACAGGTTCAGGTTCTCCCTCTACGCCTGCGAAGAGTCCGCCGCCTCCGCCGAAGGCTGCGTCGACCCCCTCCTCTTCCTCGTCCGGAATATCGACGGGCCTTGTTGTCGGAATCGCAATCGGCGGCGTTCTAATCCTTCTTTTCCTGTCTCTGTTATGTTTATGCTGCAAAAAGAAGAGGAGGAGACGCGATGAAGAATCTTACTATGTGCCTCCTCCTCTACCACCCGGTACTAAAGTTGACCCGTACCATGGCCCGCCACAACATTGGCAACAAAATGCTCCTCCTCCATCAGATCCTGTTATAGGAATGATGCCTAAGCCATCTCCTCCACCAGCAGTTGCATCAAGGCCGCCTCTCTCACCCATGAATTTGTATAACAATAATACACCTCAACCTCCAGCCTATATGAGTAGTAGTGGAGGTTCTGGCAACTATTCCGGGTCCACAAATCCTCTCCCTCCTCCTCCTCCTCCTCCTCCACATAGCTATTCCTTAGGTTTTTCAAAGAGTACGTTTACTTATGAGGAGTTAGCCATGGCAACTGATGGATTCTCGGATGCTAATCTCTTAGGACAAGGTGGGTTTGGATATGTTCATAGAGGTGTTCTTCCGAACGGAAAGGAAGTAGCAGTAAAGCAATTGAAGGCTGGAAGTGGGCAGGGGGAACGGGAATTCCAGGCAGAAATTGAGATTATTAGCCGAGTGCATCATAAACATCTTGTTTCTTTGGTTGGATATTGCATCACTGGTTCTCAGAGATTGCTTGTTTATGAATTTGTTCCGAACAATACTATGGAGTTCCATTTACATGGAAAAGGACGGCCTGTCATGGAATGGCCCATGAGGTTGAAGATTGCTCTAGGATCTGCAAAAGGACTGGCTTACCTTCACGAAGATTGTCATCCAAAAATTATTCATCGAGACATCAAAGCAGCAAATATACTACTGGATTTCAAGTTTGAAGCAAAGGTTGCCGATTTTGGACTTGCAAAGATTACTTCTGATGTTAATACCCATGTCTCCACCAGGGTGATGGGAACTTTTGGTTATCTGGCTCCTGAATATGCGTCTAGTGGAAAACTCACAGAGAAATCAGATGTCTTCTCATTTGGGGTTATGCTTTTGGAGTTGATTACTGGACGTAGACCAGTTGATGCGTCTCAAACATACACGGATGATAGCTTGGTAGACTGGGCCCGACCAATGCTAACTCGAGCTTTGGAGGATGGAAACTTTGATACCTTGGTTGATCCAAAGCTGCAACCCAATTACACCCACAGTGAAATGACTCGTATGGTTGCATGTGCTGCTGCTTGTGTCCGTCATTCTGCCAGGCGCCGTCCACGTATGAGCCAGGTGGTTCGGGCTTTGGAGGGAGATGCATCTCTGTCTGATCTTAACGAAGGCATCAGACCTGGACACAGCTCTATGTATAGTTTCCATGGTAGCTCAGACTATGACACTAGTCAATACAATGAGGACTTGAAAAAGTTCCGGAAAACAGCACTCGAGAGCCAGGAGTACGGTCAAAGTAGTGAATACAGTGGTGGCCGGACAACCAGCGAGTACGGTTTATACCCATCGGGGTCGAGCAGTGAGGGTCAAAATACCCGAGAAATGGAGATGAAAACAATGAAGAAAGACGGTCAAGATTTTTAG 1917 49.87 MSTPAPGSAPAPPSPPSTNATSPPLPAAPASPPPATPSAPPPATPSSSPPPPTTASPPAPSTESPPPPSSTTPSPPVARSPPPPPTGSGSPSTPAKSPPPPPKAASTPSSSSSGISTGLVVGIAIGGVLILLFLSLLCLCCKKKRRRRDEESYYVPPPLPPGTKVDPYHGPPQHWQQNAPPPSDPVIGMMPKPSPPPAVASRPPLSPMNLYNNNTPQPPAYMSSSGGSGNYSGSTNPLPPPPPPPPHSYSLGFSKSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEIEIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTMEFHLHGKGRPVMEWPMRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKITSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDASQTYTDDSLVDWARPMLTRALEDGNFDTLVDPKLQPNYTHSEMTRMVACAAACVRHSARRRPRMSQVVRALEGDASLSDLNEGIRPGHSSMYSFHGSSDYDTSQYNEDLKKFRKTALESQEYGQSSEYSGGRTTSEYGLYPSGSSSEGQNTREMEMKTMKKDGQDF 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1523880 1527456 + Conep02aG0030400.1 Cone2ag0294 432761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0294 638 Gene3D Transferase(Phosphotransferase) domain 1 346 554 - -
Cone2ag0294 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0294 638 Gene3D Phosphorylase Kinase; domain 1 248 345 - -
Cone2ag0294 638 MobiDBLite consensus disorder prediction 589 638 - -
Cone2ag0294 638 MobiDBLite consensus disorder prediction 1 114 - -
Cone2ag0294 638 MobiDBLite consensus disorder prediction 149 250 - -
Cone2ag0294 638 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 90 587 IPR047117 -
Cone2ag0294 638 MobiDBLite consensus disorder prediction 174 203 - -
Cone2ag0294 638 MobiDBLite consensus disorder prediction 1 106 - -
Cone2ag0294 638 MobiDBLite consensus disorder prediction 590 624 - -
Cone2ag0294 638 MobiDBLite consensus disorder prediction 235 249 - -
Cone2ag0294 638 SUPERFAMILY Protein kinase-like (PK-like) 243 543 IPR011009 -
Cone2ag0294 638 SMART serkin_6 270 543 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0294 638 FunFam Proline-rich receptor-like protein kinase PERK1 346 554 - -
Cone2ag0294 638 SUPERFAMILY beta-sandwich domain of Sec23/24 176 249 - -
Cone2ag0294 638 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524(InterPro)
Cone2ag0294 638 ProSiteProfiles Protein kinase domain profile. 270 549 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0294 638 FunFam proline-rich receptor-like protein kinase PERK1 248 345 - -
Cone2ag0294 638 Pfam Protein tyrosine and serine/threonine kinase 275 543 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0294 638 MobiDBLite consensus disorder prediction 206 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0294 Cone-Chr2:1523880 Cone6ag1615 Cone-Chr6:12479507 4.62E-185 dispersed
Cone6ag1157 Cone-Chr6:8823645 Cone2ag0294 Cone-Chr2:1523880 4.76E-66 dispersed
Cone16ag0743 Cone-Chr16:8484471 Cone2ag0294 Cone-Chr2:1523880 1.60E-290 wgd
Cone17ag0111 Cone-Chr17:581592 Cone2ag0294 Cone-Chr2:1523880 1.59E-95 wgd
Cone2ag0294 Cone-Chr2:1523880 Cone20ag1283 Cone-Chr20:8370029 7.64E-63 wgd
Cone2ag0294 Cone-Chr2:1523880 Cone4ag0731 Cone-Chr4:4028971 1.19E-224 wgd
Cone2ag0294 Cone-Chr2:1523880 Cone7ag0733 Cone-Chr7:4436877 5.49E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82596 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0294 - - - 0.0