Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0307 ATGGATTCGTCACCGTCACTACCGAAGAGCTGGAGCATCCACACCCGTCCAGAGATCATCCAGAAGTACCAAATCCTCGAGCGGGTCGGATCCGGAGCCTACTCCGACGTATACCGAGCTCGCCGGATCTCCGACGGTTTAATCTTCGCCCTAAAGGAGGTCCACGACTACCAGTCCGCGTTTCGCGAAATCGAGGCCCTCCAGATCCTACAAGGATCTCCTAACGTCGTCGTTTTGCACGAGTACTTTTGGCGCGAAGACGAGGACGCCGTGCTCGTGCTCGAGTTTCTGGCGACGGATTTGGCGTCGGTTATCGGAGAAGCGAGGAAGAAGAAGAAGGGAGGAGGAGGTGGTTCTGATGGGCCTGAGCTTGGGCTTGGTGTTGGTGAGGTTAAGAGATGGATGATCCAGATTTTGAGTGGGGTCGATGCTTGTCATCGGAGTATGATCGTTCATCGTGATTTGAAGCCCAGTAATTTGCTCATCTCGGAAGATGGAGTTCTCAAGCTCGCCGATTTCGGACAGGCAAGGATACTCCTTGAACCATACGATGTAAACGGTCCGAACCCTGAAAACACTTCACACGCCCCTGAAATTCCCCCAGAAATGGCAACCCAAGAAATGAGTAAAGAAGAATATTTCAGAGTATGGAACGACCTAAAATCCAAAACCTCGATGGATTACGAAGCCGACAAGGACACAAACCTAAACGATGGAGACGCCTCTTGCTTAGCAACTTGCACTACAAGCGACGTAGATGAAGATTTACTGAAATGCTCTTACTCTTATGAAGTAGACGTGGGAGGATTGAACCCTAAAAATGGTGCCATTCTCACTTCATGTGTAGGAACTAGATGGTTTAGAGCCCCTGAATTACTTTACGGGTCCACAAGCTACGGCCATGAGATTGATTTATGGTCATTGGGTTGCATTTTTTCCGAGCTTTTCACATTGGATCCGCTTTTTCCCGGAACAGCTGATATTGACCAAATTAGCCGGATTTTTTCTGTTTTGGGCAATTTGACTGAGGAAGCTTGGCCGGGTTGCTCTAACCTTCCGGATTTTCAAACCATATCTTTCAATACGGTGGAAAATCCGATCGGGTTAGAAGCATGCTTGCTTGGCCATTCTTTGGATGAGATATCTATAGTGAAGAGGCTTGTTTGTTATGACCCTGCTAATAGAGCCACTGCTATGGAGCTTTTGAACGACAAGTATTTCCATGAAGAGCCACTTCCAGTTCCAGTATCTGAGCTGTGGGTCCCATCTAGTAAAAATGGGCAAGACGGGGATTCTTCAGACGGTCGGTTTGATTATGGCGGAATGGGTTCAGATTCTGATTTTGATGATTTTGGGCCTGCTAATGTTACACAGACGGGGACCGGTTTTTCCATACAATTTCCTTGA 1407 47.9 MDSSPSLPKSWSIHTRPEIIQKYQILERVGSGAYSDVYRARRISDGLIFALKEVHDYQSAFREIEALQILQGSPNVVVLHEYFWREDEDAVLVLEFLATDLASVIGEARKKKKGGGGGSDGPELGLGVGEVKRWMIQILSGVDACHRSMIVHRDLKPSNLLISEDGVLKLADFGQARILLEPYDVNGPNPENTSHAPEIPPEMATQEMSKEEYFRVWNDLKSKTSMDYEADKDTNLNDGDASCLATCTTSDVDEDLLKCSYSYEVDVGGLNPKNGAILTSCVGTRWFRAPELLYGSTSYGHEIDLWSLGCIFSELFTLDPLFPGTADIDQISRIFSVLGNLTEEAWPGCSNLPDFQTISFNTVENPIGLEACLLGHSLDEISIVKRLVCYDPANRATAMELLNDKYFHEEPLPVPVSELWVPSSKNGQDGDSSDGRFDYGGMGSDSDFDDFGPANVTQTGTGFSIQFP 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1571231 1573301 + Conep02aG0031700.1 Cone2ag0307 432774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0307 468 Pfam Protein kinase domain 278 407 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0307 468 Pfam Protein kinase domain 23 198 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0307 468 Gene3D Transferase(Phosphotransferase) domain 1 123 412 - -
Cone2ag0307 468 Gene3D Phosphorylase Kinase; domain 1 14 114 - -
Cone2ag0307 468 ProSiteProfiles Protein kinase domain profile. 23 407 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0307 468 SUPERFAMILY Protein kinase-like (PK-like) 15 413 IPR011009 -
Cone2ag0307 468 SMART serkin_6 23 407 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0307 468 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524(InterPro)
Cone2ag0307 468 MobiDBLite consensus disorder prediction 420 443 - -
Cone2ag0307 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0307 468 PANTHER CELL DIVISION PROTEIN KINASE 22 407 IPR050108 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0019912(PANTHER)
Cone2ag0307 468 FunFam Cyclin-dependent kinase F-1 14 108 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0307 Cone-Chr2:1571231 Cone6ag1233 Cone-Chr6:9808097 6.24E-35 dispersed
Cone2ag0307 Cone-Chr2:1571231 Cone2ag0537 Cone-Chr2:2974503 5.42E-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82597 PF01126 Heme_oxygenase 3.00E-11 CL0230 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0307 - - - 0.0