Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0336 ATGGGGTCCATGCTAAGTGAGATTGTTTCTTACAGTGAAGAACCAGCTCTTTACCTTAAACTGGCTTTCACTTTAACTTTCTTTGCCGGTTTGTTCCAGGCTTCTTTGGGCTTACTAAGGTTGGGGTTTATGATAGATTTTCTATCAAAGGCAACTCTTGTTGGGCTTACCGCTGGTGCTGCAGTCATTGGCTTAAAGGCGGCCCCGTTGACATCAGTCATCGTATCAACTCTTGTTGTCTTCTTCCTCAGGTCAAAGGTCCCTAGAATCTCAATTATTGGCTACTTGCCCAAGGGATTGAATCCACCATCATCAAACATGCTCTCCTTTTCTGGTCCTCATCTAGCACTTGCTCTCAAAACTGTGAGTCATCATCCCACAGAAGGAATTGCAGTTGGGAGGACCTTTGCAGCTATGAAAAACTACCAAGTTGATGGAAATAAGGAAATGATGGATATTGGCCTCACGAACATGGCTGGTTCTTGCTCTTCATGCTATGTTACAACAGGATCATTTTCTCGTTCGGCTGTAAACTACAACGCCGGGGCACAAACGGCAATTTCGAATGTGATATTATCAACTGCCCCTTTTCATGCCCTGCTCTTTCTCATGCCCCTTTTCCATTATACCCCAATTGTCATTTTAGCCGCAATCATCACAACTGCCGCAATCGGGTTACTCGACTACCAAGCTGCCTATCTTTTATGGAAAGTAGACAAACTCGATTTCTTGGCTTGTCTTTCTTTGTTCTTTCCTCGGAGTTCTCTTCATTTCTGTTCCCCTCGGTCTTGCAATCACGTTTTCAAGATTCTCCTACATGTGACAAGACCAAACATTGTGACTCTAGGGAATATTCCGGGCACTCACATATACCAAAATGTGAGATTTTTAAGATGGGTAAGAGAGGAAGAAGCTATCAAAGCAAACAATGAGAATACACTTAAATGCGTAATCTTAGACATGACAGATGTGACAGCAATAGACACAAGTGGTATAGAGACAATCCATGACCTTAAGAAGATGCTGGACAAAAGATCACTGCAGCTTGTTCTGGCAAACCCAACTGGAAATGTGACCGAAAAGCTACAGAAATCAAATACTTTGAGTCATTCGGGTTAA 1119 42.81 MGSMLSEIVSYSEEPALYLKLAFTLTFFAGLFQASLGLLRLGFMIDFLSKATLVGLTAGAAVIGLKAAPLTSVIVSTLVVFFLRSKVPRISIIGYLPKGLNPPSSNMLSFSGPHLALALKTVSHHPTEGIAVGRTFAAMKNYQVDGNKEMMDIGLTNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAISNVILSTAPFHALLFLMPLFHYTPIVILAAIITTAAIGLLDYQAAYLLWKVDKLDFLACLSLFFPRSSLHFCSPRSCNHVFKILLHVTRPNIVTLGNIPGTHIYQNVRFLRWVREEEAIKANNENTLKCVILDMTDVTAIDTSGIETIHDLKKMLDKRSLQLVLANPTGNVTEKLQKSNTLSHSG 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1768979 1771661 - Conep02aG0034700.1 Cone2ag0336 432803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0336 372 CDD STAS_SulP_like_sulfate_transporter 285 372 - -
Cone2ag0336 372 ProSiteProfiles STAS domain profile. 317 372 IPR002645 -
Cone2ag0336 372 Pfam STAS domain 296 366 IPR002645 -
Cone2ag0336 372 PANTHER SULFATE TRANSPORTER 4 63 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone2ag0336 372 SUPERFAMILY SpoIIaa-like 304 369 IPR036513 -
Cone2ag0336 372 Gene3D STAS domain 250 372 IPR036513 -
Cone2ag0336 372 Pfam Sulfate permease family 3 63 IPR011547 GO:0016020(InterPro)
Cone2ag0336 372 Pfam Sulfate permease family 68 247 IPR011547 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0336 Cone-Chr2:1768979 Cone7ag1578 Cone-Chr7:10808977 1.65E-85 dispersed
Cone16ag0684 Cone-Chr16:8169836 Cone2ag0336 Cone-Chr2:1768979 1.57E-184 wgd
Cone17ag0187 Cone-Chr17:889603 Cone2ag0336 Cone-Chr2:1768979 4.19E-149 wgd
Cone2ag0336 Cone-Chr2:1768979 Cone20ag1225 Cone-Chr20:8126898 3.04E-147 wgd
Cone2ag0336 Cone-Chr2:1768979 Cone7ag0674 Cone-Chr7:3672639 3.50E-55 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0336 K17471 - cit:102621812 421.009