Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0338 ATGGAGCGGATAGAAACTAGCCAAAACCAGAACGAGCATTTGATTGATATCATCCCAGATGACAATAGTAGATTACCAAGTAACCCAGAAGACCCTATATATCATACTTCTTCAACCTCTTCAAACCAATTAAACTCTAGAAATAACCCTTCATTTATTAGCGGACAGAATGATAGAAACCAGATAAATTATGGGTTATGGATGTCTCTTGAGCTTGTAATCACCTTGATTCAGATAATATCATCTGTTATCGTATTGTCCATCTCAAAAAACGAAAAACCAGAAGCCCCTTTGTTTTTGTGGGTTTTGGGCCATGCATCAGGCTGTGTAGCAACTCTCCCTGTTCTTTATTGGCGTTTTCGTAAATTTTATTGGGATAATAATGACCAAGGAAATTTTCAATCACAGCAAGGATTGGTTATCAGTGATTCTCCTGAATCCACATCTTATACTGCTATCTCTGTTAGTCAATCGCCAGACGGGCAGATTAGTCGAAGCACCGATCTATCTTTCAGTAATGCACAAGTTCGAATAAATTTATATGAGAGACTTAACATCTTAATGGACCATTTCAAGATGGCCTTAGATGGGTTCTTTGCCGTGTGGTTTGTCGTGGGCAATGTATGGGTATTCGGAGGTCACTCCTCTCCTTCCGTAGCTCCTAATCTATACAGGCTTTCTTTAGTCTTCCTTACCTTTAGCTGTATTGGATACGCCATGCCGTTCATAATGTGCGCCACAATATGTTGCTGCATGCCTTGCATTGTTTCTATCATCGGGTTCCGTGAAGATTGTTCCCACTCTACCGGAGCCTCTTCCAAAACTATCAATTCTCTACCGACCTACAAATTCAAGTTGAATAAAAATGGAAATGATAATGAGACTGGCGGAGGATCATATGAAGGTGGGCCCAATGGGGTCCTGGCTCCTGGGACAGAGAATGAGCGTGTGGTGTTTGGAGAAGATGCGGTATGTTGTATTTGCTTAGCACAATATGCAGAGAACAACGAGCTAAGGGAGTTGCCGTGTTTGCATATCTTTCACGTGGAGTGTGTCGATAAATGGTTAGAGATCAATGCCTGTTGTCCCCTTTGCAAGTGTTACACATATGATAATAGTAGCCCTTCATTATTAGCCAGAGACTCGAGCCACTCCTAG 1158 41.62 MERIETSQNQNEHLIDIIPDDNSRLPSNPEDPIYHTSSTSSNQLNSRNNPSFISGQNDRNQINYGLWMSLELVITLIQIISSVIVLSISKNEKPEAPLFLWVLGHASGCVATLPVLYWRFRKFYWDNNDQGNFQSQQGLVISDSPESTSYTAISVSQSPDGQISRSTDLSFSNAQVRINLYERLNILMDHFKMALDGFFAVWFVVGNVWVFGGHSSPSVAPNLYRLSLVFLTFSCIGYAMPFIMCATICCCMPCIVSIIGFREDCSHSTGASSKTINSLPTYKFKLNKNGNDNETGGGSYEGGPNGVLAPGTENERVVFGEDAVCCICLAQYAENNELRELPCLHIFHVECVDKWLEINACCPLCKCYTYDNSSPSLLARDSSHS 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1787368 1789216 - Conep02aG0034900.1 Cone2ag0338 432805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0338 385 MobiDBLite consensus disorder prediction 1 53 - -
Cone2ag0338 385 SMART ring_2 325 365 IPR001841 -
Cone2ag0338 385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 310 373 IPR013083 -
Cone2ag0338 385 SUPERFAMILY RING/U-box 316 370 - -
Cone2ag0338 385 ProSiteProfiles Zinc finger RING-type profile. 325 366 IPR001841 -
Cone2ag0338 385 Pfam Ring finger domain 325 366 IPR001841 -
Cone2ag0338 385 MobiDBLite consensus disorder prediction 29 53 - -
Cone2ag0338 385 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 367 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1053 Cone-Chr17:7925638 Cone2ag0338 Cone-Chr2:1787368 1.14E-122 dispersed
Cone2ag0338 Cone-Chr2:1787368 Cone6ag0756 Cone-Chr6:3844159 2.07E-38 dispersed
Cone16ag0681 Cone-Chr16:8140932 Cone2ag0338 Cone-Chr2:1787368 3.50E-252 wgd
Cone2ag0338 Cone-Chr2:1787368 Cone4ag1828 Cone-Chr4:13199765 2.74E-116 wgd
Cone2ag0338 Cone-Chr2:1787368 Cone7ag1732 Cone-Chr7:11469243 3.32E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0338 - - - 0.0