Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0364 ATGGCGCATATTTTGCTTCATGGTACTCTTCATGCTACGATCTATGAGGTGGATAATCTGCATCATCGTGGTGGACCCAAGGTCTTCCGTAAGCTTTTGGCAAACATTGAGGAGACTGTTGGGTTTGGAAAAGGAGTTACCAAACTCTATGCTACTGTTGATCTCGAGAAAGCTAGAGTTGGGAGGACCAGAATACTAGAAAATGAACCCACTAACCCCAGGTGGTATGAATCCTTTCACATCTACTGCGCTCATATGGCTTCAAATGTTATCTTCACTGTCAAGGATGATAATCCTATTGGGGCAAGTTTAATCGGAAGGGCATACGTGCCTGTTGAGGACCTCTTAGACGGTGAGGAAGTGGATAGATGGGTTGAACTCTTGGATGCAGACAAGAATCCTATTCATGGGGAATCTAAGATTCATGTCAAACTACAGTATTTTGAGGTGACAAAGGACCCTAACTTTGGTCGTGGTCTAAGAAGTGCTAAATATCCTGGAGTTCCCTATACCTTCTTCTCGCAGAGACAGGGATGTAAGGTCTCTCTGTACCAGGATGCTCATATCCCAGATAATTTTGTTCCGAGAATCCCACTTGCTGGAGGGAAGAACTATCAGCCGCAGAGATGTTGGGAAGATATTTTTGATGCCATAACTAACGCAAAACACTTGATCTACATTACCGGCTGGTCTGTTTACACAGAAATTTCCTTGGTAAGGGACTCAAGGAGGCCAAAGCCTGGAGGGGACATCAGCCTTGGTGAGCTACTTAAGAAAAAGGCAAGTGAAGGCGTTAGGGTTCTTATGCTTGTTTGGGATGACAGAACATCTGTTGGCTTACTGAAAAAAGATGGATTTATGGCCACTCATGATCAAGAAACTGAACAGTACTTTCAGAACAGTGATGTGCACTGTGTCTTATGCCCCCGTAATCCAGATGATGGTGGAAGCATAGTTCAAGATTTACAAATCTCTACTATGTTCACCCATCATCAAAAGATTGTTGTGGTTGATCATGCTTTGCCTAATGAAGGGTCAGAAAAGAGGAGAATTGTGAGTTTTGTTGGAGGTATTGACCTTTGTGATGGAAGATATGATACCCCATTCCATTCCCTTTTCCGAACACTGGACACTGCTCATCATGATGACTTCCATCAGCCAAACTTTGCTGGTGCTTCAATAACAAAAGGCGGTCCAAGGGAGCCTTGGCACGATATCCACTCAAAGCTGGAAGGGCCCATTGCTTGGGATGTCTTGTTCAACTTTGAACAGAGGTGGAGAAAGCAAGGTGGTAAAGATATACTTGTTCAGCTGAGAGATCTTGATGAAATCATCATCCCTCCATCTCCAGTTAATTACTCAGATGATTGTGAGACTTGGAATGTTCAGTTGTTTAGATCCATTGATGGTGGGGCTGCTTTTGGATTTCCCGAAACACCTGAAGATGCAGCCAGAGCTGGTCTTGTCAGTGGAAAGGACAACATTATTGACAGAAGCATTCAGGATGCTTACATTAATGCTATTCGACGCGCTAAGGATTTCATTTACATTGAAAATCAATACTTCCTTGGAAGCTCATTTGCCTGGAGTGCTGATGGTATTAAGCCGGAAGACATAGGTGCATTGCATTTGATCCCGAAAGAGCTTTCCCTTAAGATCGTAAGCAAGATTGAAGCAGGGGAGAGGTTTAGGGTCTACATTGTTGTCCCTATGTGGCCTGAGGGATTCCCAGAGAGTGGATCCGTTCAAGCAATATTAGATTGGCAGAAGAGGACAATGGAAATGATGTATAAAGACGTCATTCAAGCTCTTAAAGCCAAGGGTATTGAGGATGATCCTCGTAATTATCTGACATTTTTCTGCCTTGGAAACCGTGAAGTAGAGAGGGAGGGAGAATATGAGCCAGCAGAGAAACCCGAAAATGATTCGGATTACGCAAGAGCCCAAGGGGCCAGACGCTTCATGATTTACGTCCATGCCAAGATGATGATTGTGGATGATGAGTACATTATTATCGGATCAGCAAACATAAACCAGAGGTCAATGGATGGAGCTAGGGACTCAGAGATAGCCATGGGAGCCTATCAACCACATCAACTATCAAGGCATGAGCCGGCTCGTGGTCAGATCCATGGGTTCCGTATGTCACTATGGTACGAACACCTTGGCATGCTAGACGACTCCTTCCTTCAGCCAGAGGGCTCAGAGTGCATAAACAAAGTGAATCAGATTGCAGATAAGTACTGGGATCTCTATTCGAGTGAGAGGCTTGAACATGATCTGCCAGGTCATCTCTTACGCTACCCAATTAATATTTCTAGTGAAGGAGAGATCACTGAGCTGCCCGGATTTGAGCATTTCCCCGACACAAAGGCTCGTATTCTCGGTGCCAAATCTGAATTCATGCCTCCAATCCTCACCACTTAG 2427 44.5 MAHILLHGTLHATIYEVDNLHHRGGPKVFRKLLANIEETVGFGKGVTKLYATVDLEKARVGRTRILENEPTNPRWYESFHIYCAHMASNVIFTVKDDNPIGASLIGRAYVPVEDLLDGEEVDRWVELLDADKNPIHGESKIHVKLQYFEVTKDPNFGRGLRSAKYPGVPYTFFSQRQGCKVSLYQDAHIPDNFVPRIPLAGGKNYQPQRCWEDIFDAITNAKHLIYITGWSVYTEISLVRDSRRPKPGGDISLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGFMATHDQETEQYFQNSDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDHALPNEGSEKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFAGASITKGGPREPWHDIHSKLEGPIAWDVLFNFEQRWRKQGGKDILVQLRDLDEIIIPPSPVNYSDDCETWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKDFIYIENQYFLGSSFAWSADGIKPEDIGALHLIPKELSLKIVSKIEAGERFRVYIVVPMWPEGFPESGSVQAILDWQKRTMEMMYKDVIQALKAKGIEDDPRNYLTFFCLGNREVEREGEYEPAEKPENDSDYARAQGARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPHQLSRHEPARGQIHGFRMSLWYEHLGMLDDSFLQPEGSECINKVNQIADKYWDLYSSERLEHDLPGHLLRYPINISSEGEITELPGFEHFPDTKARILGAKSEFMPPILTT 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1923354 1927449 + Conep02aG0037500.1 Cone2ag0364 432831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0364 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Cone2ag0364 808 FunFam Phospholipase D 467 700 - -
Cone2ag0364 808 SMART pld_4 326 364 IPR001736 GO:0003824(InterPro)
Cone2ag0364 808 SMART pld_4 654 681 IPR001736 GO:0003824(InterPro)
Cone2ag0364 808 Pfam Phospholipase D Active site motif 327 364 IPR001736 GO:0003824(InterPro)
Cone2ag0364 808 Pfam Phospholipase D Active site motif 656 681 IPR001736 GO:0003824(InterPro)
Cone2ag0364 808 SMART C2_3c 9 124 IPR000008 -
Cone2ag0364 808 CDD C2_plant_PLD 2 148 - -
Cone2ag0364 808 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Cone2ag0364 808 CDD PLDc_pPLDalpha_2 492 701 - -
Cone2ag0364 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Cone2ag0364 808 Pfam Phospholipase D C terminal 726 798 IPR024632 -
Cone2ag0364 808 PANTHER PHOSPHOLIPASE D 5 795 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cone2ag0364 808 CDD PLDc_pPLDalpha_1 201 378 - -
Cone2ag0364 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824(InterPro)
Cone2ag0364 808 FunFam Phospholipase D delta 201 444 - -
Cone2ag0364 808 Gene3D Endonuclease Chain A 200 441 - -
Cone2ag0364 808 Gene3D Endonuclease Chain A 477 704 - -
Cone2ag0364 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 654 681 IPR001736 GO:0003824(InterPro)
Cone2ag0364 808 SUPERFAMILY Phospholipase D/nuclease 152 438 - -
Cone2ag0364 808 Gene3D C2 domain 6 156 IPR035892 -
Cone2ag0364 808 Pfam C2 domain 9 127 IPR000008 -
Cone2ag0364 808 SUPERFAMILY Phospholipase D/nuclease 446 737 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1431 Cone-Chr17:9772248 Cone2ag0364 Cone-Chr2:1923354 1.29E-249 dispersed
Cone20ag0669 Cone-Chr20:4089484 Cone2ag0364 Cone-Chr2:1923354 0 dispersed
Cone2ag0364 Cone-Chr2:1923354 Cone9ag1632 Cone-Chr9:11614724 3.77E-231 dispersed
Cone4ag0929 Cone-Chr4:7710515 Cone2ag0364 Cone-Chr2:1923354 2.41E-204 transposed
Cone16ag0649 Cone-Chr16:7999422 Cone2ag0364 Cone-Chr2:1923354 0 wgd
Cone2ag0364 Cone-Chr2:1923354 Cone20ag1192 Cone-Chr20:7989422 0 wgd
Cone2ag0364 Cone-Chr2:1923354 Cone7ag0634 Cone-Chr7:3222065 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0364 K01115 - rcu:8282326 1472.6