Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0382 ATGCCCAAACTAGTTCTGAAAGCCGGAAGCCGGCCGCCGTGGGTGGGGTTAGCCGCCGCTGTATGGGTCGAAATAGCAGCCGGAAACGCCTACAACTTCCCGCTCTACTCCCCTCTTCTCAAGTCCGTTCTGGGTTTCAATCAGCAACAGGTCACAATCCTCGGAGTGGCAGTTGATATCGGAGAGAGCGTGGGTTTGCTCCCTGGCATTGCCTGTAATAAATTCCCCCCTTGGGCCGTCCTTCTCGTCGGAGCTTCCTTCTGCTTCATTGGCTATGGAGTCGTCTGGCTCGTCCTCACCCAAATCATTTCCAGCATCCCTTATTGGCTGTTATGGATCACTCTTTGTGTCGCGACAAATAGCAATGCCTGGTTCGGAACAGCTGTTCTAGTAACCAACATGAGGAACTTCCCTCTAAGCAGAGGAACTGTTTCCGGCATTCTTAAAGGCTATGTTGGAATAAGTGCTGCAGTTTACACCGTAATATACAGCATCATTCTTAAAGACTCTGCTTTGAATCTACTCCTGTTTCTAACAATCGCGATTCCTGTTTTGTGCTTAGCCATGATGTACTTTATCCGCCCTTGTACTCCTGCTTCTGGCGAAGATTCTTCCGAACATGTCCATTTTCTCTTCACTCAAGCCACCAGTGTTCTTCTTGCCATATATCTTCTCTCCTTAACTATTATATATGATTCCATTTCGATAAGTGATGTGATTGCTTACACTCTAGTCGCCCTTGTGGTCGTCCTTTTATTGTCTCCTCTTGCGATTCCGGTGAAAATGACATTTTTACCCTCAAATAGAAAGAGATTCGGTCCTCGTGTTGATTCTTCGGATCTTGGAGAAAGTGGCGATTCTTCAAGCAATGTAGATGCCTTATTGACTCCATCCTCTTCATCTGCTTATCTAGTTGATGTTCTTGAGAGTGAGGATGCTTCAGATGTAGAGACCCTTCTTGCAGTTGGAGAGGGGGCGGTGAAGAAGAAGAGGAGACCTAAGAGAGGGGAGGATTTCAAGATCCGGGAAGTTGTTGTCAAGGCTGATTTTTGGCTTCTTTGGTTTGTCTACTTTCTTGGGGTGGGGCCTGGTGTGACTGTCCTTAATAACATGTCTCAAATCGGGGTTGCTTATGGTACCGACGACACAACTACGCTATTGGCTCTCTTTAGTTTTTGTAATTTTGCTGGACGGCTTGGATCAGGCGTGGTTTCTGAACACTTTGTCAGGTCACGGTCAATTCCTCGGCCATTTTGGATGATGTGCTCAATAATACTCATGAGCATATCATTCCTTCTATACGCATCCGCTCTAAACGGTACTCTCTATGCTTCAACCGCTCTAATAGGGTTCTGTTACGGGGTTTTATACTCTACGATGGTCCCCACTGCTTCCGAACTCTTTGGCCTCAAACATTTTGGTTTGATCTACAACGTCTTGCTGCTGGGAAACCCTATTGGTGCGCTTCTTTTCTCGGCTACTCTGGCTGGTTCGGTGTATGACACGGAAGCTGCTAAGCAAGGGACTAGTTCTTGTGTAGGAGCTGAATGCTTTAGGCTCACATTCCTTGTTCTTGCTGGGGTTTGTGGGTTAGGTACTGTCTTGAGCATAATTCTGACTCTTAGAATAAGGCGGGTCTATTCAACGCTTTATTCTGGGGGTTCGTTTAGTAGCTTGCTTCAAAGCTCAGCTCATTGA 1698 46.64 MPKLVLKAGSRPPWVGLAAAVWVEIAAGNAYNFPLYSPLLKSVLGFNQQQVTILGVAVDIGESVGLLPGIACNKFPPWAVLLVGASFCFIGYGVVWLVLTQIISSIPYWLLWITLCVATNSNAWFGTAVLVTNMRNFPLSRGTVSGILKGYVGISAAVYTVIYSIILKDSALNLLLFLTIAIPVLCLAMMYFIRPCTPASGEDSSEHVHFLFTQATSVLLAIYLLSLTIIYDSISISDVIAYTLVALVVVLLLSPLAIPVKMTFLPSNRKRFGPRVDSSDLGESGDSSSNVDALLTPSSSSAYLVDVLESEDASDVETLLAVGEGAVKKKRRPKRGEDFKIREVVVKADFWLLWFVYFLGVGPGVTVLNNMSQIGVAYGTDDTTTLLALFSFCNFAGRLGSGVVSEHFVRSRSIPRPFWMMCSIILMSISFLLYASALNGTLYASTALIGFCYGVLYSTMVPTASELFGLKHFGLIYNVLLLGNPIGALLFSATLAGSVYDTEAAKQGTSSCVGAECFRLTFLVLAGVCGLGTVLSIILTLRIRRVYSTLYSGGSFSSLLQSSAH 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2013854 2016148 - Conep02aG0039300.1 Cone2ag0382 432849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0382 565 Pfam Major Facilitator Superfamily 354 542 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cone2ag0382 565 SUPERFAMILY MFS general substrate transporter 221 545 IPR036259 -
Cone2ag0382 565 Pfam Nodulin-like 13 260 IPR010658 -
Cone2ag0382 565 CDD MFS_Mch1p_like 12 533 - -
Cone2ag0382 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 547 - GO:0016020(PANTHER)
Cone2ag0382 565 Gene3D MFS general substrate transporter like domains 342 545 IPR036259 -
Cone2ag0382 565 SUPERFAMILY MFS general substrate transporter 10 197 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0042 Cone-Chr2:219837 Cone2ag0382 Cone-Chr2:2013854 3.30E-115 dispersed
Cone2ag0382 Cone-Chr2:2013854 Cone4ag0635 Cone-Chr4:2974147 3.52E-245 dispersed
Cone3ag0960 Cone-Chr3:5472731 Cone2ag0382 Cone-Chr2:2013854 7.11E-80 transposed
Cone16ag0623 Cone-Chr16:7901708 Cone2ag0382 Cone-Chr2:2013854 0 wgd
Cone2ag0382 Cone-Chr2:2013854 Cone20ag1163 Cone-Chr20:7857844 4.13E-298 wgd
Cone2ag0382 Cone-Chr2:2013854 Cone7ag0598 Cone-Chr7:2876639 5.63E-249 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0382 - - - 0.0