Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0396 ATGGCTACAGTAATGTCGGCGGCCGGGATTCAAACCAAGGCCTCCGCGATCTCCTCCACCGTCAAACATCTCGGCTTCAATCGATGTCTACCTCAAACCTACGCCGTGTTCACTCACCATTCAAATCACAGTCTTTTGCGCCGCCGCGTTAGTAGAAGAAACCTCACCGTCGCAATGGCAGGTGCTAATACTCCTCTCGAAGTCTTGGTCAAAGCCTCCGTCTCTGTCCCTAACAAGCTCGGTGATTTCCCATTTTGCCAAAGGGTACTGCTGACTCTGGAAGAGAAGCATCTGCCTTATGATCTGAAGTTGGTGGATCTGACTCAGAAGCCAGAATGGTTCTTAAAGATCAATCCAGAAGGCAAAGTACCAGTGATCAAACTTGATGAGAAGTGGGTTGCAGATTCAGATGTTATTACTCAATCTCTTGAAGAGAAGTATCAAAATCCGCCTTTGGTAGCTTACATGGAGTGGTTCAAAGATCTTCTCCACATTTATTGGGTCCTTTCATCAAATGGGAAAGAGGTTTATGCGGTGGATTTGTCACTTGGACCAAAGCTGTATCATCTAGAAATCGCCCTAGGTCATTACAAGAATTGGTCAATTCCAGATACCCTGTCACATGTTAAATCCTATACCAAGGGCATATTCTCAAGAGAGTCGTTTATGAAAACCCGTGCACTTCCTGAGGATGTAATCACCGGTTGGTATCCGAAAGTTGCAGGTTAA 729 45.68 MATVMSAAGIQTKASAISSTVKHLGFNRCLPQTYAVFTHHSNHSLLRRRVSRRNLTVAMAGANTPLEVLVKASVSVPNKLGDFPFCQRVLLTLEEKHLPYDLKLVDLTQKPEWFLKINPEGKVPVIKLDEKWVADSDVITQSLEEKYQNPPLVAYMEWFKDLLHIYWVLSSNGKEVYAVDLSLGPKLYHLEIALGHYKNWSIPDTLSHVKSYTKGIFSRESFMKTRALPEDVITGWYPKVAG 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2082661 2084822 - Conep02aG0040700.1 Cone2ag0396 432863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0396 242 FunFam Glutathione S-transferase DHAR3 chloroplastic 64 152 - -
Cone2ag0396 242 Pfam Glutathione S-transferase, N-terminal domain 84 145 IPR004045 -
Cone2ag0396 242 Gene3D - 147 241 - -
Cone2ag0396 242 Gene3D Glutaredoxin 63 146 - -
Cone2ag0396 242 SUPERFAMILY Thioredoxin-like 84 149 IPR036249 -
Cone2ag0396 242 SUPERFAMILY GST C-terminal domain-like 173 240 IPR036282 -
Cone2ag0396 242 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 76 151 IPR004045 -
Cone2ag0396 242 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 172 239 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Cone2ag0396 242 CDD GST_N_family 84 144 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1319 Cone-Chr1:56385452 Cone2ag0396 Cone-Chr2:2082661 1.04E-58 dispersed
Cone2ag0396 Cone-Chr2:2082661 Cone5ag0301 Cone-Chr5:1270905 1.28E-50 dispersed
Cone16ag0611 Cone-Chr16:7832131 Cone2ag0396 Cone-Chr2:2082661 9.42E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0396 K21888 - csv:101203335 285.804