Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0408 ATGTCTTCTTCACCTTCTCCAAATTCACCCCCTTCTCCATCTCCACCACCTTCAACCTCCTCTTCCTCCCCACCACCCGATTCTCCTCCTCCTCCACCATCTAAAAACCCTGATAAAACCGCTGACTCACCTGATTCCTCCTCCCCTTCACCCCCTTCAAGCTCTTCAGCTCCACCTCCTCAATCTTCATCACCACCACCTCCTCCTCCTTCTCCCATTGCTCCTCCTCCCACCCCACCACTTTCACCTCCACCATCTGAAACACCACCACCAACAACATCACCGCCACCTCCTCCTCCGGCCGCTACCCCACCCCCTTCACTGCCAGAATCTCCGCCACCTTCACCTCCACCACCAACATCCCCACTACCCATTACTCCTCCTCCCCCTTCAAATTCACCACCACCTCCCCATCCCTCACCCCCACCGCCGCCAGTTGATTCTCCACCTCCTCAAACCACCCCCACTCCTCCTGCTGCTACCCCACCACCCTCCCCAACTGCTTCACCTCCTCCGCCTGACATTTCTACACCACCACCTTCTTCAAACTCTCCCCCTCCACCCACGAAAAAGTCAAAATCTCCTCCACCTCCTGCTCAAACCCCTCAATCTGCACCACCACCACCCTCACCTCCTAATTCCACATTGCCATCACCTCCTCCTTCGGTCCCCTCATCATCTACACCAACTCCAATTTCTTCTCCTGCTTCTCCTAGCAATTCATCAAGTGCAAGTCCTTCTAGCTCGCCTTTATCTTCTGATCTTCCTGAAAAACCAACTGCAAAAACAACGACTGGTACTAATGTAGGATCGCCTTCACAAAAAGGAGGGTTAAGCACTGGAACATATGCAGCCATTGCAGGTGTGTTTGGGGTTCTACTGCTTAGTCTTGTTGTATTTGCTGTTTGGTTTGCTCAAAAACGGAAGAGGAGAAGAGGGTTGTACCATATTCCCTACAATGTGCCTTCTCCTTTTTCCTCCTCCCAAAATTCAGATTCAATATTCCTAAAATCTCAATCACCAGCTCCCCTAATAGGAAGCCATTCTGCTAGCAAGAAATATGTGTACTCTTCATCAGAAGGAGGAGGAGTAAGTAGTAATTCAAGAGCATTTGCCTACGAAGAACTAGTCGAAGCAACAAGTGGATTTTCACCAGTCAATCTGTTAGGTGAAGGTGGGTTTGGTTGTGTATATAAGGGCACCCTATCAGATGGAAGAGAAGTAGCCGTAAAGCAGCTCAAAGTGGGTGGTGGACAAGGGGAAAGGGAATTCAGAGCAGAAGTCGAGATTATTAGCCGTGTTCATCATCGCCATTTGGTCTCTCTGGTCGGTTATTGTATTTCCGAGTATCAGAGATTGCTTGTGTATGATTTTGTTCAGAACGATACTCTTCATCACCATCTTCATAGTGAAAACAGCCCCATTTTAGGTTGGGAAACTCGGGTTAGAATTGCTGCTGGGGCAGCTCGTGGAATTGCTTACCTACACGAAGACTGCCATCCACGCATTATTCACAGGGATATTAAATCGTCAAACATCCTGCTTGATAGCAACTTCGAAGCTCAGGTTGCTGATTTCGGGCTTGCAAAGCTAGCATCAGACACACATACTCATGTAACTACCCGTGTTATGGGAACCTTTGGATACATGGCTCCAGAATATGCAACTAGTGGAAAATTAACCGACAAGTCCGATGTTTATTCCTTTGGAGTTGTGCTTTTGGAGCTTATTACTGGTCGCAAGTCTGTTGATTCCTCTCAACCCTTAGGTGATGAGAGTCTAGTTGAATGGGCTCGACCCTTACTTGCACAAGCACTAGAAGACGAAAGGTTCGAAGAGTTGGCAGACCCCAAGCTAGATAATAACTACGTCGACTCCGAGATGTTCCGAATGATAGAAGTAGCAGCAGCTTGTGTCCGTCATTCAGCAGTAAAACGGCCCCGAATGAGTCAGGTGGTGAGAGCCTTGGACTCTTTAGATGATATGACGGATATTGCTAATGGAGTGAAACTGGGTCAAAGTGGGGTGTTTGATTCGGCCCAACAATCGGCCCAAATTCGAATGTTTCAAAGGATGGCGTTTGGAAGTCAAGATTACAGTTCAGAATATACTGATCGTAGTAGAAGTCAGAGTAGTTGGAGGAGCAGAGAGTCTGGAGAGCAGAGGAGTAGAGAGTTCGAGCAGAGGAGTTCGTTTGCACCTGTAAATCCATCTGGGTTATGGAACAACTGA 2232 48.25 MSSSPSPNSPPSPSPPPSTSSSSPPPDSPPPPPSKNPDKTADSPDSSSPSPPSSSSAPPPQSSSPPPPPPSPIAPPPTPPLSPPPSETPPPTTSPPPPPPAATPPPSLPESPPPSPPPPTSPLPITPPPPSNSPPPPHPSPPPPPVDSPPPQTTPTPPAATPPPSPTASPPPPDISTPPPSSNSPPPPTKKSKSPPPPAQTPQSAPPPPSPPNSTLPSPPPSVPSSSTPTPISSPASPSNSSSASPSSSPLSSDLPEKPTAKTTTGTNVGSPSQKGGLSTGTYAAIAGVFGVLLLSLVVFAVWFAQKRKRRRGLYHIPYNVPSPFSSSQNSDSIFLKSQSPAPLIGSHSASKKYVYSSSEGGGVSSNSRAFAYEELVEATSGFSPVNLLGEGGFGCVYKGTLSDGREVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEYQRLLVYDFVQNDTLHHHLHSENSPILGWETRVRIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDSNFEAQVADFGLAKLASDTHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVYSFGVVLLELITGRKSVDSSQPLGDESLVEWARPLLAQALEDERFEELADPKLDNNYVDSEMFRMIEVAAACVRHSAVKRPRMSQVVRALDSLDDMTDIANGVKLGQSGVFDSAQQSAQIRMFQRMAFGSQDYSSEYTDRSRSQSSWRSRESGEQRSREFEQRSSFAPVNPSGLWNN 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2164959 2169622 - Conep02aG0041900.1 Cone2ag0408 432875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0408 743 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 234 692 IPR047117 -
Cone2ag0408 743 MobiDBLite consensus disorder prediction 709 727 - -
Cone2ag0408 743 MobiDBLite consensus disorder prediction 51 228 - -
Cone2ag0408 743 Pfam Protein tyrosine and serine/threonine kinase 388 656 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0408 743 FunFam Proline-rich receptor-like protein kinase PERK8 355 458 - -
Cone2ag0408 743 Gene3D Transferase(Phosphotransferase) domain 1 459 672 - -
Cone2ag0408 743 FunFam proline-rich receptor-like protein kinase PERK8 459 671 - -
Cone2ag0408 743 Gene3D Phosphorylase Kinase; domain 1 345 458 - -
Cone2ag0408 743 MobiDBLite consensus disorder prediction 700 743 - -
Cone2ag0408 743 SUPERFAMILY Protein kinase-like (PK-like) 364 656 IPR011009 -
Cone2ag0408 743 CDD STKc_IRAK 389 659 - -
Cone2ag0408 743 MobiDBLite consensus disorder prediction 1 38 - -
Cone2ag0408 743 SMART serkin_6 383 659 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0408 743 MobiDBLite consensus disorder prediction 1 276 - -
Cone2ag0408 743 MobiDBLite consensus disorder prediction 229 276 - -
Cone2ag0408 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0408 743 MobiDBLite consensus disorder prediction 728 743 - -
Cone2ag0408 743 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524(InterPro)
Cone2ag0408 743 ProSiteProfiles Protein kinase domain profile. 383 659 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0645 Cone-Chr12:5901197 Cone2ag0408 Cone-Chr2:2164959 1.04E-167 dispersed
Cone13ag1041 Cone-Chr13:8618068 Cone2ag0408 Cone-Chr2:2164959 2.04E-160 dispersed
Cone19ag1031 Cone-Chr19:7670104 Cone2ag0408 Cone-Chr2:2164959 1.74E-160 dispersed
Cone2ag0408 Cone-Chr2:2164959 Cone9ag0499 Cone-Chr9:2387964 7.05E-180 dispersed
Cone7ag1787 Cone-Chr7:11729437 Cone2ag0408 Cone-Chr2:2164959 5.06E-72 dispersed
Cone2ag0408 Cone-Chr2:2164959 Cone16ag0598 Cone-Chr16:7757238 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82600 PF05553 DUF761 1.90E-06 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0408 - - - 0.0