Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0437 ATGTCTCTCCTCTTGATCATCACCATAACCATCCTCTCAATCCAAATCCCACCATCTATCTCCCAAGATGACGCAGAAAAATATCAAAATTGCAGCAAAACTTTCACATGTGGAGATTTGGTGGACCTAGGCTACCCGTTCTCGGTCTCGACCCGAGCCTCATACTGCGGCCACCCCGGCTTCAACCTCAACTGCAGCAGGGATGCCCCGATAATCACAATCGACTCGATCGACTATACAATAATCGATGTTGATAACACCACACAGAGGATCACAATTGCGAGCTCAAATTACTACAATACCATTTGCCCCGACAGCCTCATAGACACCACTATTGATTTCTCCCTCTTTAACTATTCTTCTACTGCAGTGAACCTCACTCTACTCTATAACTGCCCGACTTCTGCTGTTCCGGCAGACTTCATCTGCCAGACAGGCACTTATAGTTACGTTGAGAAACAGGGCTTAAGCGTCACGGAAAGTTATTGCAAGACAGTGTTTGTGACCGTTTCTTCATCGGAATACTCGAGTGTCTTGGCAAATCCTAGTTCGGGCGCAGTGGTTGATGCTTTTGATGCTGGGTTTGAATTGCAGTGGAAGTTAGATAATGGGGAGGGAGCCTTTTCATCTACTTGTGGAAGTGGACCAACAGGACCAGATCAAGACAAGAAGACACTGTTAGTAATCATACTTACTCCACTTGCTCTACTCTTTCTCTTACTAGTCTTTCTCATATGTTGCCTTAGAATGAGAATGCGCAATACAAAAGCTAAGAAATCAAAGTTGAAAGTAAAGAATACAACATCTATAGGAGATTTTTTAAACAGCAATGCCCCTAATCTGCAAATCTTTAGTCTTGCTGACCTTGACAAAGCCACCTATAAGTTCGCAATGGAGAATAAGCTTGGCCATGGTGGTTATGGCCCTGTTTACAAGGGGTTGTTATCTAATGGACAAGAAGTAGCAGTGAAAAAGCTTTCAAAATCTTCGATGCAAGGTTTCGAAGAATTCAAGAATGAAGTTATTCTTACAGCAAAATTGCAACATGTTAATCTAGTGAGAGTTCTTGGATTTTGCATCGACCAAGATGAACAAATGCTTGTCTATGAGTACATGCCCAACAAGAGCTTGGATCTCTATCTCTTTGGTCCTGTAAGAAGAATTGCATTAGACTGGAGAAAACGTGCTCAAATTATTTATGGAATAATTCAAGGACTTCTATATCTCCAAGAGTACTCAAGATTTATAATAATTCATAGAGACTTGAAGGCCAGCAATATTTTACTGGATCATGACCTCAAGCCAAAAATCTCGGATTTCGGAATGGCTAAAATCTTCAACAAGGACGAGTATGAAGCAATTACAAACCAGATTTGTGGAACATATGGTTATGTTCCGCCTGAATATGTCAAACAAGGACTATACTCGAGAAAAACGGATATTTATAGCTTCGGGGTTCTACTGTTACAAATCATAAGTGGAAAGAAGAATGGTTGCTTATATGGTTCGGATGAAAATTTAACCCTTTTGGAATATGCATATGAGCTATGGAAAGAAGGACACGGAATGGAGTTTATGGATCCGTCACTCGATGATACAAACTGTTCGTGCAAACTGATAAGATGCCTACACATAGCGTTGTTATGTGTTCAGGAAGATGCAAATGATAGACCTTCCATGATCGAAGTTTCTTCGATGCTCAAAAATGAGACAGTAGTCTTGGTCCCAGCAAATCTGAACCGACCCGCTTTTTCAACAAAAAGAAATGAAGACGACGAAGACAAATGCAAATTGCATATAAAAATATGTTCGGTTAATGATGCAACAATGTCACAAGTGCAAGGCAGATAG 1851 40.79 MSLLLIITITILSIQIPPSISQDDAEKYQNCSKTFTCGDLVDLGYPFSVSTRASYCGHPGFNLNCSRDAPIITIDSIDYTIIDVDNTTQRITIASSNYYNTICPDSLIDTTIDFSLFNYSSTAVNLTLLYNCPTSAVPADFICQTGTYSYVEKQGLSVTESYCKTVFVTVSSSEYSSVLANPSSGAVVDAFDAGFELQWKLDNGEGAFSSTCGSGPTGPDQDKKTLLVIILTPLALLFLLLVFLICCLRMRMRNTKAKKSKLKVKNTTSIGDFLNSNAPNLQIFSLADLDKATYKFAMENKLGHGGYGPVYKGLLSNGQEVAVKKLSKSSMQGFEEFKNEVILTAKLQHVNLVRVLGFCIDQDEQMLVYEYMPNKSLDLYLFGPVRRIALDWRKRAQIIYGIIQGLLYLQEYSRFIIIHRDLKASNILLDHDLKPKISDFGMAKIFNKDEYEAITNQICGTYGYVPPEYVKQGLYSRKTDIYSFGVLLLQIISGKKNGCLYGSDENLTLLEYAYELWKEGHGMEFMDPSLDDTNCSCKLIRCLHIALLCVQEDANDRPSMIEVSSMLKNETVVLVPANLNRPAFSTKRNEDDEDKCKLHIKICSVNDATMSQVQGR 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2350642 2352856 - Conep02aG0044800.1 Cone2ag0437 432904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0437 616 Pfam Protein kinase domain 298 499 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0437 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone2ag0437 616 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 160 583 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone2ag0437 616 Pfam Wall-associated receptor kinase galacturonan-binding 31 94 IPR025287 GO:0030247(InterPro)
Cone2ag0437 616 SMART serkin_6 296 573 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone2ag0437 616 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 259 371 - -
Cone2ag0437 616 Gene3D Phosphorylase Kinase; domain 1 272 371 - -
Cone2ag0437 616 Gene3D Transferase(Phosphotransferase) domain 1 372 576 - -
Cone2ag0437 616 SUPERFAMILY Protein kinase-like (PK-like) 279 567 IPR011009 -
Cone2ag0437 616 FunFam Uncharacterized protein 372 577 - -
Cone2ag0437 616 CDD STKc_IRAK 302 569 - -
Cone2ag0437 616 ProSiteProfiles Protein kinase domain profile. 296 572 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0561 Cone-Chr16:7512546 Cone2ag0437 Cone-Chr2:2350642 0 dispersed
Cone16ag0563 Cone-Chr16:7528819 Cone2ag0437 Cone-Chr2:2350642 1.80E-223 dispersed
Cone2ag0437 Cone-Chr2:2350642 Cone4ag0612 Cone-Chr4:2817433 5.96E-143 dispersed
Cone2ag0437 Cone-Chr2:2350642 Cone2ag0439 Cone-Chr2:2358824 1.91E-176 proximal
Cone16ag0560 Cone-Chr16:7508271 Cone2ag0437 Cone-Chr2:2350642 2.36E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82601 PF04053 Coatomer_WDAD 3.60E-163 CL0186 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0437 - - - 0.0