Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone2ag0486 ATGCTCGGAACCTTGGAGAGGTACCAGAAATGCAGTTATAGCTCATCCGATCATCAAGTTAGCAAACCTGCCCGTGAACTGGAGAGCAGCTATCGAGAGTACATGAAACTGAAGGCTACATTTGAATCCCTACAAAGAACTCAAAGGAACTTTCTGGGAGAAGACTTGGGCCCACTAAACTCAAAAGAGCTTGAGCAGCTTGAGCGTCAGCTTGAGTCTTCACTCAAGCAAGTTAGGTTCACTAAGACCCAGTATATGCTGGACCAGCTTTCGGATCTTCAAAACAAGGAGCACATGTTGATGGAAGCTAACAGATCTCTAACTATGAAGCTAGATGAAGTGAGCATAAGAAATCATCATCACCTCAGGCAATCATGGGAAGGGGCCGAACAAGGCTTCTCATTCGCTCCTCCACCTCCTCCTCCTCCTCCTCCTTCACATCATCCCGAACATGATAACGATCACAATGCTCACTCTCAGGCCTTCTTTCAGCCTCTCGATTGCAATCCCACTTTGCAAATCGGGTATTCTCAGGCAGTGTCGGAACAGATGACTGCTAGCAGCTCAGGCACGAATCAAGGCCAACTACAAGTACATGGTTTCCTCCATGGATGGATGCTTTAA 624 47.12 MLGTLERYQKCSYSSSDHQVSKPARELESSYREYMKLKATFESLQRTQRNFLGEDLGPLNSKELEQLERQLESSLKQVRFTKTQYMLDQLSDLQNKEHMLMEANRSLTMKLDEVSIRNHHHLRQSWEGAEQGFSFAPPPPPPPPPSHHPEHDNDHNAHSQAFFQPLDCNPTLQIGYSQAVSEQMTASSSGTNQGQLQVHGFLHGWML 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2633642 2635125 - Conep02aG0049800.1 Cone2ag0486 432953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone2ag0486 207 MobiDBLite consensus disorder prediction 130 157 - -
Cone2ag0486 207 ProSiteProfiles K-box domain profile. 27 117 IPR002487 GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Cone2ag0486 207 Coils Coil 64 84 - -
Cone2ag0486 207 PANTHER SERUM RESPONSE FACTOR HOMOLOG 4 154 IPR050142 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Cone2ag0486 207 Pfam K-box region 24 111 IPR002487 GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0608 Cone-Chr14:3029221 Cone2ag0486 Cone-Chr2:2633642 4.96E-33 dispersed
Cone15ag0345 Cone-Chr15:1605768 Cone2ag0486 Cone-Chr2:2633642 4.94E-14 dispersed
Cone15ag0614 Cone-Chr15:3192831 Cone2ag0486 Cone-Chr2:2633642 1.71E-40 dispersed
Cone2ag0486 Cone-Chr2:2633642 Cone4ag1281 Cone-Chr4:10526697 4.46E-09 dispersed
Cone2ag0486 Cone-Chr2:2633642 Cone18ag1146 Cone-Chr18:8262260 7.11E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone2ag0486 K09264 - mdm:103404655 248.44